| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1755 |
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| Symbol | |
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| ID | 4687244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1864794 |
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| End bp | 1865381 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639834761 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_981986 |
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| Protein GI | 121604657 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.273127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTGGC CAGGCCAAGG CTTTACAGTG AATCCAGCCT CGGCGTCTTG TACCGGGCGA
TTTATTTTTT TGATTGGAAT ATCCATGGGC ATGTTTAGTT TTATCAAGGA AGCCGGAGAA
AAGCTGTTCG GCCGGGGCGA AGCCAAGGCG GCCCAGGAAG CCGTAGCCGC AAAACCCACG
CCTGAAAACG TGGCCGCGCT GAGCAAGACG GCTGGGGATG CGATTGCCGC CTACATCAAC
AGCATGGGCC TGAAAGTCGA TGCGCTGCAG GTCAGTTTTG ATGCACCGAG CGGGACCGTG
ACGGTTTCCG GCGTGGCGCC TGACCAGGCG ACCAAGGAAA AAGTGCTTCT GTGCTGCGGC
AATGTAGGCC AGGTTTCGGC TGTCAAGGAC ATGCTGACCG TTGTCAGCAG TTCGCCCGAA
TCGCAGATGT ATGTGGTCGT CAGCGGCGAC AACCTGTCCA AAATCAGCAA GCAGTTCTAC
GGCACGCCCA ACAAATACAC CCAGATTTTC GAGGCCAACA AGCCCATGCT GAGCGACCCG
GACAAGATTT ATCCGGGCCA GGTTCTGCGA ATTCCACCGG AGGCTTAA
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| Protein sequence | MLWPGQGFTV NPASASCTGR FIFLIGISMG MFSFIKEAGE KLFGRGEAKA AQEAVAAKPT
PENVAALSKT AGDAIAAYIN SMGLKVDALQ VSFDAPSGTV TVSGVAPDQA TKEKVLLCCG
NVGQVSAVKD MLTVVSSSPE SQMYVVVSGD NLSKISKQFY GTPNKYTQIF EANKPMLSDP
DKIYPGQVLR IPPEA
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