Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1748 |
Symbol | |
ID | 4688495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1856821 |
End bp | 1857888 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639834754 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_981979 |
Protein GI | 121604650 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAACA TTACACGAGT CGGCGTTGAT TTGGCCAAGA ATGTTTTCCA GGTTCACGCT GTGGATGCCA GTGGCAACGT GGTCACTAAC CGGATGCTCA AGCGTGACCG ATTTCTGGCA TGGTGTTGCG ATCTGCCGCC CGGCTGCCTG GTCGCGATGG AAGCTTGCAG TGGCGCCCAT CACTGGTGTC GGCAACTCCG CGATCGAGGC CTGGACGCCA GGATGATTGC AGCCCAGTTC GTTGCGCCGT ACCGTATTCA GGGCAAGAGC GGCAAGAACG ATGCCAACGA TGCAGCAGCG ATTTGCGAGG CGGCCTCAAG ACCGCACATG AATTTCGTGC CGCCCAAGAC CCTTGCTCAG CAAGGCATGC TGTGCGTGCA TCGCCTGCGT GAAGGGCTCA AACAAGAGCG CACTGCCTGC ATCAACCGAA TCCGAGGTTT GCTGGCCGAG TTTGGCATCG TTCTGCCTCA AAGCCCACAG GTGCTGCGAC AACACTTGAG TGACCTGATT GAGGATGCTG GCAATGACAT CGCCGGCATG GCACGGCTGG TTCTGCAAAG AGCGCAAGAG CACTGGCGAG AAATCGAAGA GCACGTCCAG TGGTGCGACC AGCGCATTGC CGCTCATCAG AAGGACGATG AGCAGGTCCA GCGCGCAGCA GAGCTCAAGG GCATTGGACC CGTCACCGCC TCAGCGGTCG TGGCGACGGT GGGCGACTTC AAGCAGTTCA AGAACGCAGC GCAGTTCGGC GCCTGGCTGG GGCTGACACC GAAGCAAAAC TCCAGCGGAG GCAAGTCAAG TCTGAGCAGC ATCACCAAAC GGGGCAGCAA TTACTTGCGC GGCTTGCTGA TTCAGGGCGC CAAGTCAGTC GTTTTGGTTG GCAAGCACAA CGACGATCCC ATCTCACAGT GGGCGCAGCG CCTTCGCGAG CGATGTGGGT GGCAAAAAGC CGTCGTGGCC TTGGCCAACA AGAACGCCCG GATTTTGTGG GCCGTCATGA CGAAGGAAAA GCGCTATGAC GCCTTTCACG TCAGCATCCC ACCTTCAGCC ATTGCCGCCA CAGCGTAA
|
Protein sequence | MSNITRVGVD LAKNVFQVHA VDASGNVVTN RMLKRDRFLA WCCDLPPGCL VAMEACSGAH HWCRQLRDRG LDARMIAAQF VAPYRIQGKS GKNDANDAAA ICEAASRPHM NFVPPKTLAQ QGMLCVHRLR EGLKQERTAC INRIRGLLAE FGIVLPQSPQ VLRQHLSDLI EDAGNDIAGM ARLVLQRAQE HWREIEEHVQ WCDQRIAAHQ KDDEQVQRAA ELKGIGPVTA SAVVATVGDF KQFKNAAQFG AWLGLTPKQN SSGGKSSLSS ITKRGSNYLR GLLIQGAKSV VLVGKHNDDP ISQWAQRLRE RCGWQKAVVA LANKNARILW AVMTKEKRYD AFHVSIPPSA IAATA
|
| |