Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1717 |
Symbol | |
ID | 4686899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1819887 |
End bp | 1821665 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639834721 |
Product | acetolactate synthase 3 catalytic subunit |
Protein accession | YP_981951 |
Protein GI | 121604622 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0366089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCA CAAAAGCGGA AATTGCTTCC GCAGCGGCAA CATCTGCCCA AACCAACCCT CAGGATCTGC GGGGCGCTGA AATCCTCGTA AAAGCGCTTC AGGCCGAAGG TGTCAAGTAC ATCTGGGGCT ATCCCGGCGG TGCGGTTCTT CATATTTACG ACGCCTTTTA CAAGCAGGAC TCGATCCAGC ATGTGCTGGT GCGCCACGAG CAGGCCGCAG TACATGCCGC CGATGGTTAT GCCCGCGCCA CTGGCGATGT TGGCGTTGCG CTGGTCACTT CCGGCCCTGG CCTGACCAAT GCTGTGACCG GGATTGCAAC GGCCTACATG GACAGCATCC CCATGGTCAT CATCAGCGGC CAGGTACCGA CCGCCGCCAT TGGCCTGGAT GCCTTCCAGG AATGCGATAC CGTCGGTATC ACCCGCCCGA TCGTCAAGCA CAACTTCCTG GTCAAGGATG TACGGGACAT GGCCGAGACC ATGAAAAAGG CTTTCCATAT CGCCCGCACC GGCCGGCCTG GTCCTGTGGT GGTCGATGTG CCCAAGGATG TCTCGTTCAA CAAGACCCTG TATACCGGCT ACCCGAAGAG CGTTGAAATG CGCTCCTACA ACCCGGTTCG CAAAGGCCAT GCCGGGCAGA TCCGCAAAGC CTTGCATCTG CTGATGGCGG CCAAGCGGCC CTATATTTAC ACTGGCGGCG GCGTATTGCT CAGCAACGCT TCGCAAGAGT TGCGCACGCT GGTGGACATG CTGGGTTACC CATGTACCCA TACGCTGATG GGCCTGGGCG CCTACCCGGC CAGCGACAAG AAGTTTCTCG GCATGCTGGG CATGCATGGC ACGCTCGAAG CCAACAACGC CATGCAGAAT TGCGACGTGC TGCTAGCTGT CGGCGCGCGT TTTGATGACC GTGTGATTGG CAACCCCAAG CACTTCGCCC AAAACGAACG CAAGATCATC CACATCGACA TCGACCCGTC GAGCATTTCC AAGCGCGTGA AAGTCGATAT TCCCATCGTG GGCGATGTCA AGGATGTGCT GACCGAACTG ATCGCCATGA TTCGCGAATC GGGCCTGAAG CCTGACGCCG ATGCGCTGGG CGGCTGGTGG AGCACGATTG ACGAGTGGCG CAAGCGGGAC TGCATGAAGT ACAGCCTGGG CACCGGCGAC GTGATCAAGC CGCAGTATGT GGTCGAGACG CTCTGGAACA TGACCAAGGA CGCCGACACC TACATCACCT CGGATGTCGG CCAGCACCAG ATGTGGGCCG CGCAGTACTA CAAGTTCGAC GAGCCGCGCC GCTGGATCAA TTCCGGCGGT CTGGGCACCA TGGGCGTCGG CATTCCCTAT GCCATGGGCA TCAAGCTGGC CAAGCCGGAC TCGGAAGTGT TCTGCATTAC CGGCGAAGGC TCGGTGCAGA TGTGCATCCA GGAGCTTTCA ACCTGCCTGC AGTACAACAC GCCGATCAAG ATCGTGTCGC TCAACAACCG CTACCTGGGC ATGGTGCGCC AGTGGCAGGA AATCGAATAT GCCGGCCGCT ACAGCAGCAG CTACATGGAT GCACTGCCCA ATTTCGTGAA GCTCGCCGAA GCCTATGGCC ATGTCGGCAT GCTGATCGAA AAGCCGCAGG ATGTGGAGCC TGCACTGCGC GAAGCGCGCA AGCTCAAGGA CCGTACCGTG TTCATGGATT TCCGCACCGA CCCGACGGAA AACGTGTTTC CGATGGTCAA GGCCGGCAAG GGCATCACTG AAATGCTGCT CGGGTCCGAA GACCTCTGA
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Protein sequence | MEITKAEIAS AAATSAQTNP QDLRGAEILV KALQAEGVKY IWGYPGGAVL HIYDAFYKQD SIQHVLVRHE QAAVHAADGY ARATGDVGVA LVTSGPGLTN AVTGIATAYM DSIPMVIISG QVPTAAIGLD AFQECDTVGI TRPIVKHNFL VKDVRDMAET MKKAFHIART GRPGPVVVDV PKDVSFNKTL YTGYPKSVEM RSYNPVRKGH AGQIRKALHL LMAAKRPYIY TGGGVLLSNA SQELRTLVDM LGYPCTHTLM GLGAYPASDK KFLGMLGMHG TLEANNAMQN CDVLLAVGAR FDDRVIGNPK HFAQNERKII HIDIDPSSIS KRVKVDIPIV GDVKDVLTEL IAMIRESGLK PDADALGGWW STIDEWRKRD CMKYSLGTGD VIKPQYVVET LWNMTKDADT YITSDVGQHQ MWAAQYYKFD EPRRWINSGG LGTMGVGIPY AMGIKLAKPD SEVFCITGEG SVQMCIQELS TCLQYNTPIK IVSLNNRYLG MVRQWQEIEY AGRYSSSYMD ALPNFVKLAE AYGHVGMLIE KPQDVEPALR EARKLKDRTV FMDFRTDPTE NVFPMVKAGK GITEMLLGSE DL
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