| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1680 |
|---|
| Symbol | rnhA |
|---|
| ID | 4689372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1776416 |
|---|
| End bp | 1776901 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639834684 |
|---|
| Product | ribonuclease H |
|---|
| Protein accession | YP_981914 |
|---|
| Protein GI | 121604585 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.254579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.760209 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATT CAGCAGCAGA GCCCACTATT TCCCAACCAC AACACGTCGT GATCTACACC
GACGGCGCCT GCAAGGGCAA CCCCGGCCCC GGAGGCTGGG GCGCCTTGCT GGCCTCTGGC
GGCACCGAAA AGGAAATCTT CGGCGGCGAG ATGGGCACCA CCAACAACCG CATGGAAATG
ACGGCCGTTA TCGAGGCGCT GGCGGCCCTG AAAAAGCCCT GCACCGTGAC CCTGTACCTC
GACAGCCAGT ATGTGCTCAA GGGAATCACC GAATGGATTC ACGGCTGGAA GGCCAGGGGC
TGGCGCACGG CGGCCAAGGC GCCCGTCAAA AACGTGGACT TGTGGCAGCG GCTCGATGCG
CTGCTCGTGT CCAGCGGCCA CAGCATCGAC TGGCGCTGGG TTCGGGGCCA CAACGGCGAC
CCCGGCAACG AGCGCGCCGA TGCGCTGGCC AACAAGGGCG TGGAGCGTGC CCTTGGGCGG
CTTTAG
|
|---|
| Protein sequence | MTDSAAEPTI SQPQHVVIYT DGACKGNPGP GGWGALLASG GTEKEIFGGE MGTTNNRMEM
TAVIEALAAL KKPCTVTLYL DSQYVLKGIT EWIHGWKARG WRTAAKAPVK NVDLWQRLDA
LLVSSGHSID WRWVRGHNGD PGNERADALA NKGVERALGR L
|
|---|
| |