Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1678 |
Symbol | |
ID | 4689452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1774746 |
End bp | 1775516 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639834682 |
Product | hydroxyacylglutathione hydrolase |
Protein accession | YP_981912 |
Protein GI | 121604583 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.820114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTTGT TTCCCATTTC CGCTTTTGCC GACAATTACC TGTGGTTGCT GCATGACGGC AAGCGCGCCC TGGTCGTGGA CCCTGGCGAC GCAGAGCCGG TATTGCGCGC GCTGGAACAG TCCGCGCTGC AACTGGAATC AATTCTAGTC ACGCATCACC ATGCGGATCA CACCGGCGGC GTCGATGCAC TGCGCAAAGC CACCGGCGCC AAAGTCTATG GCCCGGCCAA CGAACGCATT CCTGCGCCAT TCGAGCCATT GCATGAAGGC GACTCGGTGC ACACCCTGGG CCTGGATTTT CAGGTGCTGG ACGTGCCGGG CCACACGGCG GGCCATATTG CCTTTTACAC CCCGGACATG GATGGCAGGC CGCTGCTGTT TTGCGGCGAC ACGCTTTTCT CAGGCGGCTG CGGCCGGCTG TTTGAAGGCA CGCCGGCGCA AATGCTGGCA TCGCTTGACA AGCTGGCGGC ATTGTCCGGT GCCACCCGGG TTTGCTGCGC CCACGAATAC ACGCTGGACA ACCTGCGCTT TGCGCTGGCC GTTGAGCCTG ACAATACCGA CCTGGCAGCG TACCAGCAGC ATTGCCTGCG GCTGCGGGCT CAGGGACAAC CGACCTTGCC CAGTTCCATC CAGCAGGAAA TCCTGATCAA TCCTTTTTTA CGCACGCGGC GAGCCAGTCT TGTGTCAGCC GCACGCCACT TTGACGCGTC AGTCCATGAC GACACCTCGG TATTTGCCGC CCTGCGGCAA TGGAAAAACC AATTTAAATG A
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Protein sequence | MYLFPISAFA DNYLWLLHDG KRALVVDPGD AEPVLRALEQ SALQLESILV THHHADHTGG VDALRKATGA KVYGPANERI PAPFEPLHEG DSVHTLGLDF QVLDVPGHTA GHIAFYTPDM DGRPLLFCGD TLFSGGCGRL FEGTPAQMLA SLDKLAALSG ATRVCCAHEY TLDNLRFALA VEPDNTDLAA YQQHCLRLRA QGQPTLPSSI QQEILINPFL RTRRASLVSA ARHFDASVHD DTSVFAALRQ WKNQFK
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