| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1656 |
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| Symbol | |
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| ID | 4689487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1750610 |
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| End bp | 1751503 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834661 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_981891 |
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| Protein GI | 121604562 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.876977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCACA ACAGCGGCAA TATCGGCGAT TTCGGCATGG ACACGATTTC GCTGGCCGGG
CCTCTTGAGG CCAAGCTCAA GGCCGTGCGC GAAGCCGGCT TCACCCAGAT CATGCTGGCC
GCCCGCGACC TGGTCGGCCA CCCCGACGGC ATGGAGGCCG CCGTGGCCGC CGTGCGCGCC
AGCGGCCTGC GCGTCACCGG CTTTCAGGTG CTGCGCGATT TTGAAGGCCT CTCGGGCCAT
CTGCACGCCT ACAAGATCGA CATCGCCAAG TCGATGCTGG CGATGTGCCA TGCGCTCGAT
TGCCGGCTGC TGCTGGTCTG CTCCTCGACC TCGGTGCATG CCAGCGGGGA CACGCAGGCG
CTGGTCAAGG ACTTGCGCAA GCTCGCCATG CTGGCCATTC CGATGAACAT CAAGGTCGCC
TACGAAGCGC TGTCCTGGGG CCGGACCGTC AATGAATTTC CGCAGGCCTG GGACCTGGTT
TGCCAGGCCG ACATGCCCAA CCTGGGCCTG GGCCTGGACT CGTTCCACCT GTTCGCCACC
AACACGCCGC TCGACGAGCT GGAGATGCTG GACCCGCAGA AAATCTTTCT GGTGCAGCTG
GCCGATTTCA TGTGGCTGGA CATCAAGTCG GTCCAGGAGC GCATCGACAC GGCGCGGCAT
TTCCGGGTGT TTCCGGGCGA GGGCGTGCAC AGCGAAGCGC TGGCCGCGCT GGTGGCCCGG
CTGCACGCGC TGGGCTACCG GGGCGACTAC AGCTTTGAGG TGTTCAACGA CGACTACCAG
CAGATGCCGC TGCCCACGGT GGCCCGGCGC GCCTGGCGCT CGGCGCAGTG GCTGGGCGAG
GATGTGCTGC GGCGTTCGGT GCCGCTGCCC AACCAGATCC GGCTCAAACG CTGA
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| Protein sequence | MNHNSGNIGD FGMDTISLAG PLEAKLKAVR EAGFTQIMLA ARDLVGHPDG MEAAVAAVRA
SGLRVTGFQV LRDFEGLSGH LHAYKIDIAK SMLAMCHALD CRLLLVCSST SVHASGDTQA
LVKDLRKLAM LAIPMNIKVA YEALSWGRTV NEFPQAWDLV CQADMPNLGL GLDSFHLFAT
NTPLDELEML DPQKIFLVQL ADFMWLDIKS VQERIDTARH FRVFPGEGVH SEALAALVAR
LHALGYRGDY SFEVFNDDYQ QMPLPTVARR AWRSAQWLGE DVLRRSVPLP NQIRLKR
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