| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1650 |
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| Symbol | |
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| ID | 4689407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1744973 |
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| End bp | 1746154 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639834655 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_981885 |
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| Protein GI | 121604556 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.154413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC GATTCGCTCT TAAATTAATA GCTGCCTGTG CAATAGCAGC AAGCGCAACA
GCCGGTTTTG CGCAAGAAGT GATCAAGATC GCCAACATTG TCGAGCTGTC CGGCAGCGGC
GCCAGCGCCG GCACCAATTT CAAGAACGGC GTGGAACTGG CGGTCAAGGA AATCAATGCC
GCCGGTGGCA TCCTGGGCAA GAAAATCCAG ACCACCACCA ACGACACCCA GAGCAACCCG
GGCGTGGCCA AGGGCTTGAC GCAAAAAGCC ATCGACAACG ACGTGTTCGC CATTTTCGGC
CCGGTGTTCT CCGGCTCCAT CATGGTCAGC ATGGCCGAGT CGCGCCGCGC CGAGGTGCCC
AATTTCACCG GCGGCGAGGC GGCCGGCATC ACCGAGCAGG GCAACCCCTA CGTGTTTCGC
ACCAGCTTCA CCCAGGCGAG CGCCATGCCC AAGGTGGCGC GCTACATCAG CGAGCAGGCC
AAGCTGAAAA CCCTGGCCAT CATTTATGTG AATAACGACT TCGGCAAGGG TGGGCTGGAT
GCGCTGAAAA AAGCGCTGGC CAATTCGCCG ACCAAGGTCG TGGCCGAGAT TTCCACCGAC
AACGGACAGG TTGACTTTTC CGCCGCCGTG CTCAAGGCCA AGCAGAGCAA TGCCGACGGC
GTGTTCGCCT ATTCAAACGA AGAAGAGTCG GCGCGCATCC TGCGCGAGCT GCGCAAGCAG
GGCTGGACCA AGCCCATCAT TGGCGAAACC ACGCTGACCG GCCAGAAAGT CATTGAACTG
GCCGGCGACG CCGCCAACGG CGCGATTGCC CACGTCGGCC TGACGGTCGA TGCGCCGCAG
CCGGCGATTC GCGCCTTTCG CGCCAAGTTC GAGAAGGAAT ACAAATATGT CTCCGACCAC
AACGGCATGA AAGGCTACTC GGGCATTTAC ATCCTCAAGG CGGCGATTGA AAAGACCGGC
AAGCTCGACC GCAAGGCGGT GGCCGCCACG CTGCACACGC TCAAGGTCAA GGCCGCCGAC
CAGCCCGGCG TGCTGATGGA TGTGTCGTTT GACGCCAAAG GCGACCTGGA CCGCGAGAGC
TTCATGATCG AGGTCAAGAA CGGCAAGCAG GAAGTCGTTT CCATCCTGCC ACCGCTGGGT
GCCGGGGCCA CGCCAGCCGC CGCAGCAGCA GCGAAAAAAT AA
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| Protein sequence | MNKRFALKLI AACAIAASAT AGFAQEVIKI ANIVELSGSG ASAGTNFKNG VELAVKEINA
AGGILGKKIQ TTTNDTQSNP GVAKGLTQKA IDNDVFAIFG PVFSGSIMVS MAESRRAEVP
NFTGGEAAGI TEQGNPYVFR TSFTQASAMP KVARYISEQA KLKTLAIIYV NNDFGKGGLD
ALKKALANSP TKVVAEISTD NGQVDFSAAV LKAKQSNADG VFAYSNEEES ARILRELRKQ
GWTKPIIGET TLTGQKVIEL AGDAANGAIA HVGLTVDAPQ PAIRAFRAKF EKEYKYVSDH
NGMKGYSGIY ILKAAIEKTG KLDRKAVAAT LHTLKVKAAD QPGVLMDVSF DAKGDLDRES
FMIEVKNGKQ EVVSILPPLG AGATPAAAAA AKK
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