Gene Pnap_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1612 
Symbol 
ID4687200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1699652 
End bp1700194 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content56% 
IMG OID639834615 
Productphasin family protein 
Protein accessionYP_981847 
Protein GI121604518 
COG category 
COG ID 
TIGRFAM ID[TIGR01841] phasin family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000706224 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG CTGAACAACT CATGGCCTCC CACAAAGCCA ACATCGAAAC CCTGTTTGGT 
TTGACCCAAA AGGCCTTCGA AGGCGTCGAA AAGCTGGTTG AACTGAATGT TCAAGCCACC
AAGGCTGCAC TGGCCGAAAC CGCCAACAAC GCGCAAGCCG TGCTGAACGC GAAAGACGCA
CAAGAACTGT TGGCCCTGCA AGCCAGCATG GTCCAGCCCC TGGCTGAAAA AACCGCTGCC
TACAGCCGTC ACCTGTATGA CATCGCCCAA TCCGCCGGTG CTGAATTCAG CAAGACGCTT
GAAGGCCAGA CCGCTGAAGC CCAGAAGAAG TTTGCCGACC TGGTTGAAAG CGCCACGCAA
AATGCACCTG CCGGTTCCGA AACCGCAGTG ACCATGATGA AAAGCGCCAT GACCGCTGCC
AACTCCGCCT TCGAGTCGGT GCAAAAAGCC GTCAAGCAAG CCGGCGACAT GGCCGAAACC
AACTTCAACA CGGTATCCGA ATCCGCCGTG AACGCTTCCA AAAGCGTTTC CAAGAAGCGT
TAA
 
Protein sequence
MLTAEQLMAS HKANIETLFG LTQKAFEGVE KLVELNVQAT KAALAETANN AQAVLNAKDA 
QELLALQASM VQPLAEKTAA YSRHLYDIAQ SAGAEFSKTL EGQTAEAQKK FADLVESATQ
NAPAGSETAV TMMKSAMTAA NSAFESVQKA VKQAGDMAET NFNTVSESAV NASKSVSKKR