| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1489 |
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| Symbol | |
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| ID | 4688456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1577081 |
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| End bp | 1577887 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834492 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_981724 |
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| Protein GI | 121604395 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.334737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGC ATCTGCAACG TCGCACCTTC ACCGGCGCCG CCCTGGCGCT GGGCCTGGCC
GCCACCCTGT CCGCGTGGGC GCCCGCCGCC AGCGCGCAGA GCGTCGCCGA CATCAAGAAA
AAAGGCGAGC TGACGGTCGG CATGCTGGTC GATTTCCCGC CCTACGGCAC CATGAACAGC
AGCAACCAGC CCGACGGCTA CGACGCCGAC GTGGCGCGCC TGCTGGCCAA GGATCTCGGC
GTGAAGGTCA ACCTGGTGCC GGTGACCGGC CCCAACCGCA TTCCGTTCCT GCTGACCAAC
AAGGTCGATC TGCTGGTCGC TTCGCTGGCC GTGACGCCCG AGCGCGCCAA GCAGGTCCAG
TTCTCCAAGC CCTACGCGGC CGCCAGCATC GTGCTGTACG GCGACAAGAA AGCCAGCCTC
AAAGCCCCGG CCGACCTGAA AGGCAAGCGA GTGGGCGTGG CTCGCGCCAG CACGCAGGAC
ATCGCGCTGA CCGCCGCAGC GCCCGAAGGC ACCGAAATCC GCCGTTTCGA CGACGACGCG
TCGGCCATGC AGGCGCTGCT GTCGGGACAG ATCGATGCCA TCGGCTGCTC GACCACGGTG
GCCGCGCAAA TCGCCAAGCG CGCGCCGGCC AACACCTTTG AAAACAAGTT CGTGCTGCGC
CAGCAGGTGA TGGGCGTGGC GATGCGCCCC GGCCAGGCCG AACTGCTGAA AACCGTGGAC
GACTTTGTCG CCCGCAACAC GGCCAACGGC GAGCTCAACA AGCTCTACCA GAAATGGCTG
GAAACCGACC TGCCCAAACT GCAGTAA
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| Protein sequence | MIKHLQRRTF TGAALALGLA ATLSAWAPAA SAQSVADIKK KGELTVGMLV DFPPYGTMNS
SNQPDGYDAD VARLLAKDLG VKVNLVPVTG PNRIPFLLTN KVDLLVASLA VTPERAKQVQ
FSKPYAAASI VLYGDKKASL KAPADLKGKR VGVARASTQD IALTAAAPEG TEIRRFDDDA
SAMQALLSGQ IDAIGCSTTV AAQIAKRAPA NTFENKFVLR QQVMGVAMRP GQAELLKTVD
DFVARNTANG ELNKLYQKWL ETDLPKLQ
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