Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1478 |
Symbol | |
ID | 4689922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1566249 |
End bp | 1569074 |
Gene Length | 2826 bp |
Protein Length | 941 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834481 |
Product | DNA polymerase I |
Protein accession | YP_981713 |
Protein GI | 121604384 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.495398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCTG ATAAAAAAAC CTTGCTGCTG GTCGATGGCT CCAGCTACCT GTACCGCGCC TTTCATGCCA TGCCCGACCT GCGCGTCACC CCCGGCGACC CGCAAAGCCC GGCCACCGGC GCGATTCGCG GCATGGTCAA CATGATGCAA AAACTGCGCA AGGATGTGCG GGCCGACTAT GCGGTCTGCG TGTTCGACGC CAAGGGGCCG ACCTTTCGCG ATGCGCTGTA TCCCGAGTAC AAGGCCCAGC GCTCGGCCAT GCCCGACGAT CTGCGCAGCC AGGTCGAGCC GATTCATGAA GTGGTGCAAC TGCTGGGCTG GAAAGTGCTC GCCGTGCCCG GCGTCGAGGC CGACGACGTG ATCGGCACGC TGGCCTGCAT GGCCTCAAGC CAGCAAATCG AAGTCATCAT CTCCAGCGGC GACAAGGACT TGAGCCAGCT GGTCGATGAA CACATCACCG TCATCGACAC CATGAATGAC CGTCGCCGCG ACCTGGCTGG TGTTGAAGCG GAATTCGGCG TGCCGCCGCG CCTGATGGTC GATTACCAGA CGCTGGTCGG CGACACTGTT GACAACGTGC CGGGCGTGCC CAAGGTGGGC CCGAAAACCG CCGTGAAGTG GCTGCTCGAA TATGGCTCGC TCGATGCGCT GGTGGCCCGG GCTGGCGAGA TCAAGGGCAT CGTCGGCGAG AACCTGCGCA AGTCGCTGGA CTGGCTGCCC AAGGGCCGCG AGCTGCTGAC GATCAAGAAA GACTGCGAAC TGGCCGACTA CATCGACGGC TTGCCTGCTA TGGATTCAAT AGCTATCGGC GCACAGCAGA CGAGCGCATT GAGGACTTTT TATCTGAAAT ATGGCTTCAA GGGACTGGTC GGCCAGATTG ATGCCGAAAA TACGCCGCCC GAACTTGTCG GCGGCCCTGA ACGCCGCAAG CCCCGCGCGC CGACGGCCTC GCCAGATTCG CCCGGCCTGT TCGACGACGA CGAGCCTTCG CTGCTTGACA CGCCGCTGGC CGGGCGCGCC AGCAACCTGC TGTATGAAAC TATCCTGACC TGGGAGGCGC TGGACCGCTG GCTGGCCAAA ATCGAAGCGG CCGAACTGGT GGCAGTCGAT ACCGAAACCA CGTCGCTCGA TGAAATGCGC GCGCAGATTG TCGGCGTGAG CTTCAGCGTG ACGCCGGGCG AGGCCGCCTA CATTCCGCTG ACGCACGACT ACCCTAGCGC CCCCGAGCAG TTGCCGCTGG ATGAGGTGCT GGCCCGGCTC AAGCCCTGGC TTGAAAACCC GGCCAGACCG AAGCTGGGCC AGAACATCAA ATACGACCGC CATGTGTTCG CCAACCACGG CATCGAGGTG CAGGGCTACG CGCACGACAC CATGCTGCAA AGCTATGTGC TCGAAGTGAC CAAGCCGCAC GGGCTGGCCA GCCTGGCCGA GCGGCATGTG GGGCGCAGCG GCATCAACTA TGAAGACCTG TGCGGCAAGG GCGTACACCA GATCAAGTTC AACCAGGTCG ATATTGCCAG GGCAGCCGAA TACTCGTGCG AAGACTCCGA CCAGACGCTT GACGTGCACC GGGTGCTGTG GCCGCAACTG CAGGCCAATG AAAAGCTGCT GTTTATCTAT CAGCTGGAAA TGCAGAGCAG CGAAACGCTC TACCGCATCG AGCGCAACGG CGTGCTGATC GACGCGCCCA TGCTGGCCAG GCAAAGCCAT GAACTGGGCC AGCGCCTGCT GCAGCTGGAG ACCGAGGCGT ACGAGATGGC CGGCCAGCCC TTCAACCTGG GCAGCCCCAA GCAATTGGCC GAAATATTCT TTGACAAGCT GGGCATGAAG GTGGTCAAGA AAACGCCCAG CGGCGCGCGC AGCACCGACG AGGATGTGCT TGAAAAGCTG GCCGAAGATC ACCCGCTGCC GGCCAAGCTG CTGGAACACC GCTCGCTTTC CAAGCTCAAG GGCACCTACA CCGACAAGCT GGCCCAACTG GCCAACCCGC GCACCGGCCG CGTCCACACC CACTATGCGC AGGCCGTCGC CGTGACCGGC CGGCTGTCGA GCAACGACCC CAACCTGCAG AACATCCCGG TCAAGACCGC CGAGGGCCGG CGCGTGCGCG AAGCCTTCGT GGCGCCTGCC GGCAGCGTGA TCGCCAGCGC CGACTATTCG CAGATCGAGC TGCGCATCAT GGCGCACATC AGCGGCGATG AATCGTTGCT GCATGCCTTC ACCGCCGGGC TGGACGTGCA CCGCGCCACG GCAGCCGAAG TGTTCGGCGT CGCGCTGGAG CAGGTCAGCA GCGAACAGCG CCGCTACGCC AAGGTCATCA ACTTCGGCCT GATCTACGGC ATGAGCAGTT TTGGCCTGGC GAAGAACCTG GGGATTGAAA CCAAGGCGGC GGCCGCCTAC ATCGACCGCT ATTTCCAGCG CTATCCCGGC GTGAAGCACT ACATGGATTC GACCCGCCAA CTGGCCAAGG AGCAGGGCTA CGTCGAGACC GTCTTCGGCC GGCGCCTGCT GTTGCCCGAA ATCAACTCGC CCAACGGCCC GCGCCGCGCC GGCGCCGAGC GCGCCGCCAT CAACGCGCCC ATGCAGGGCA CCGCCGCCGA CCTGATCAAG CTCAGCATGG TGAAGGTGCA GCAAGTACTG GATGCCGAAA AGCGCGGCAC GAAAATGATC ATGCAGGTGC ATGACGAACT GGTGTTTGAA GTCCCCGAGG CCGAGGTGGA ATGGGTGCGC ACCGAGATTC CGCGCCTCAT GGCCGGCGTG GCCGAGCTCA AGGTGCCGCT GCTGGCCGAG ATCGGCTTTG GGCCGAACTG GGAACAGGCG CACTGA
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Protein sequence | MSPDKKTLLL VDGSSYLYRA FHAMPDLRVT PGDPQSPATG AIRGMVNMMQ KLRKDVRADY AVCVFDAKGP TFRDALYPEY KAQRSAMPDD LRSQVEPIHE VVQLLGWKVL AVPGVEADDV IGTLACMASS QQIEVIISSG DKDLSQLVDE HITVIDTMND RRRDLAGVEA EFGVPPRLMV DYQTLVGDTV DNVPGVPKVG PKTAVKWLLE YGSLDALVAR AGEIKGIVGE NLRKSLDWLP KGRELLTIKK DCELADYIDG LPAMDSIAIG AQQTSALRTF YLKYGFKGLV GQIDAENTPP ELVGGPERRK PRAPTASPDS PGLFDDDEPS LLDTPLAGRA SNLLYETILT WEALDRWLAK IEAAELVAVD TETTSLDEMR AQIVGVSFSV TPGEAAYIPL THDYPSAPEQ LPLDEVLARL KPWLENPARP KLGQNIKYDR HVFANHGIEV QGYAHDTMLQ SYVLEVTKPH GLASLAERHV GRSGINYEDL CGKGVHQIKF NQVDIARAAE YSCEDSDQTL DVHRVLWPQL QANEKLLFIY QLEMQSSETL YRIERNGVLI DAPMLARQSH ELGQRLLQLE TEAYEMAGQP FNLGSPKQLA EIFFDKLGMK VVKKTPSGAR STDEDVLEKL AEDHPLPAKL LEHRSLSKLK GTYTDKLAQL ANPRTGRVHT HYAQAVAVTG RLSSNDPNLQ NIPVKTAEGR RVREAFVAPA GSVIASADYS QIELRIMAHI SGDESLLHAF TAGLDVHRAT AAEVFGVALE QVSSEQRRYA KVINFGLIYG MSSFGLAKNL GIETKAAAAY IDRYFQRYPG VKHYMDSTRQ LAKEQGYVET VFGRRLLLPE INSPNGPRRA GAERAAINAP MQGTAADLIK LSMVKVQQVL DAEKRGTKMI MQVHDELVFE VPEAEVEWVR TEIPRLMAGV AELKVPLLAE IGFGPNWEQA H
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