Gene Pnap_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1439 
Symbol 
ID4688019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1527466 
End bp1528080 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content58% 
IMG OID639834442 
ProductNUDIX hydrolase 
Protein accessionYP_981674 
Protein GI121604345 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCGA TTCCTGGGCC TGACGGGAAA ATCGGCAAGC AGGATGCGCA TCTGTTGGAG 
ACGCAAGCCA GCTCGGAAAA AATCCTCAAA GGTCATTTCC TACAGGTTTT TCGCGACACC
GTCAGTCTGC CCGACGGCAA ACACACCACG CGTGAGTATG TCGTTCACCC GGGCGCGGTG
ATGATCGTTG CACTGCTTGA CGATGGCAAC GTGGTGCTGG AACGCCAGTA CCGTTATCCG
GTGCATGCCG TCATGATCGA ATTTCCTGCA GGCAAACTGG ACGCCGGCGA ATCGTCGCTG
GCCTGCGCGC AGCGCGAACT CCAGGAAGAA ACCGGCTACA CCGCACGCGA ATGGGTCAGG
GCCGGCGTTC TGCATCCGGT CATTTCCTAT TCCACCGAAT TCATTGATAT CTGGTTTGCG
CGTGGCTTGA GTCTGGGCGA GCGCAAGCTG GATGCAGGCG AATTTCTGGA TGTCTTTACC
GCCACGCCAA CCGAACTGCT GGGCTGGTGC GGCAACGGCC AGGTGACCGA TGCCAAGACC
CTGACGGGCA TGCTATGGCT GCAAAACATG TTGTCGGGTG CATGGACATT GGAATGGCAG
GCAGCAGGGC TGTGA
 
Protein sequence
MTPIPGPDGK IGKQDAHLLE TQASSEKILK GHFLQVFRDT VSLPDGKHTT REYVVHPGAV 
MIVALLDDGN VVLERQYRYP VHAVMIEFPA GKLDAGESSL ACAQRELQEE TGYTAREWVR
AGVLHPVISY STEFIDIWFA RGLSLGERKL DAGEFLDVFT ATPTELLGWC GNGQVTDAKT
LTGMLWLQNM LSGAWTLEWQ AAGL