| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1339 |
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| Symbol | |
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| ID | 4686120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1429632 |
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| End bp | 1430534 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639834342 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_981575 |
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| Protein GI | 121604246 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.150488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCGAC TTGATGCCCT CAGGGCATTG GTGCTGTCAA AGCAGTGTGG CAGCTTTGCC
GGGGCCGCGC GGGCCTTGGG CGTGACGCGT TCGCAGATCA GCAAACTCAT CGCTTCGCTG
GAGGCGGACT ACGGCGGCGC GCTGTTTGCC CGCACCACAC GCTCCGTCGC CCTGACCAGC
GCCGGCGCCA CCCTGCACAG CTATGCGCTG GAACTGCTGG CCATTGACGC CGAGGCGCGC
GAAGCCATGG CCGCCTTGCA GGGCATGGTG GCCGGGCCAT TGCGTGTCAA TGCGCCGATG
TCCTTTGGTC AATTGGTGCT GGCGCCGCTG CTGCCGGGCT TTCTGGCGCT GCATCCGCAA
ATCGAGTTGC GCGTCGAGTT GAATGACCGG CTGCTCGATC CGTTCGAGCA CGGCTTTGAC
CTGACGCTGC GCATTGCCGA GCTGGAGGAC TCTTCGCTCG CGGCGCGGCG CCTGTGCGGC
GTGCCCCGGG CGATTTATGC CGCTCCCGGC TACCTGCAGG CGCAGGGCGT GCCGGACTCG
CCGCAGGCAC TCAAGGCGCA CCGCTGCCTG AACTACGCGC ACACCAACAC CGGCCATGTG
TGGCGCCTGG GCAGGGGCGG CGAAAAAGCG CATGTCGCCG TCGGCGGGCC GCTGTGCTCG
AACAACGGCG AAGTGCTGCT GGAGGCCGCC ATGGCCGGCG CCGGGCTGAT CCTGCAACCG
GCGTTTCTGG CGGCCGGGCA CCTCGCGTCG GGCCGGCTGG TGCCGGTGCT GGCGCAGTGG
CAGGAGTCCC CGGAAATCGC CCTGTATGCG CTGTATCCGG CCACTCGCCG GGTGCCTGTC
GCCGTGCGTG CCCTGATCGA CTACCTGGTC GCCACGCTGC CCCAGGCCAT GGCCGCGACC
TGA
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| Protein sequence | MDRLDALRAL VLSKQCGSFA GAARALGVTR SQISKLIASL EADYGGALFA RTTRSVALTS
AGATLHSYAL ELLAIDAEAR EAMAALQGMV AGPLRVNAPM SFGQLVLAPL LPGFLALHPQ
IELRVELNDR LLDPFEHGFD LTLRIAELED SSLAARRLCG VPRAIYAAPG YLQAQGVPDS
PQALKAHRCL NYAHTNTGHV WRLGRGGEKA HVAVGGPLCS NNGEVLLEAA MAGAGLILQP
AFLAAGHLAS GRLVPVLAQW QESPEIALYA LYPATRRVPV AVRALIDYLV ATLPQAMAAT
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