Gene Pnap_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1333 
Symbol 
ID4686293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1424291 
End bp1424842 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content58% 
IMG OID639834336 
Productcytochrome B561 
Protein accessionYP_981569 
Protein GI121604240 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.666388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.933151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTC CAAAATTCGC GCATCGCTAC CACATGGCGT CCATTTCACT GCACTGGCTG 
ATGCTTGCCT TGTTCATTGC GGTGTACGCC AGCATTGAGC TGCGCGTGCT GTTTGAAAAA
GGCACCGAAC TCCGCGAAAC GATGAAAAGC CTGCACTTCA TGTTCGGCCT TCTGATGTTT
TTCCTGGTCT GGCTGCGCAT CGCGATGCGC TTCAAATACC CTGCGCCACG CATTGAACCG
GCCCCGCCCC AATGGCAGGT GCTTGCCGCC AGACTGGCCC ACCTGATGCT CTACGCCCTC
ATGATCGGCA TGCCGCTGGC CGGCTGGCTG CTGCTGAGTG CCTCCGGCAA ACCGATTCCG
TTTTTTGGCC TGGAGCTTCC GGCGCTGATC GGAAAAAACA AGGAGCTGGC AGGCCAGATC
AAGGAAGTTC ACGAACTCGT GGGCACCATC GGCTACTTTT TGATTGGCGC GCATGCTGCG
GCGGCCCTGT TTCATCACTA CATCAAACGC GACAGCACCC TGCTGAGCAT GCTGCCAAAA
ACCGCCGCCT GA
 
Protein sequence
MSLPKFAHRY HMASISLHWL MLALFIAVYA SIELRVLFEK GTELRETMKS LHFMFGLLMF 
FLVWLRIAMR FKYPAPRIEP APPQWQVLAA RLAHLMLYAL MIGMPLAGWL LLSASGKPIP
FFGLELPALI GKNKELAGQI KEVHELVGTI GYFLIGAHAA AALFHHYIKR DSTLLSMLPK
TAA