Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1307 |
Symbol | |
ID | 4686818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1399239 |
End bp | 1399901 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639834310 |
Product | phospholipase/carboxylesterase |
Protein accession | YP_981543 |
Protein GI | 121604214 |
COG category | [R] General function prediction only |
COG ID | [COG0400] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.839904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTCC AGATCATTGA AGCCCAGACC GGCGAAAACC CCGTCGCCAC CATTCTCATC ATGCACGGCC TGGGCGCCGA CGGGCGCGAC TTCGTGCCGA TTGCCGAGCA GCTCGATTTG TCGAGCATCG GGCCGGTGCG CTTTTTGTTT CCGAGCGCGC CGCACATGCC GGTGACGATC AACGGCGGCT ACAGCATGCC CGCCTGGTAC GACATTTTGG GCGCCGACCT GGTCAGCCGC CAGGACGAAG CCGGCATGCG CCAGACCCAG GCGTCCATGG AAGCCATCAT CGCCAACGAA AAAGCGCGCG GCATTGCGGC CAGCCGCATC GTGGTCGCCG GTTTCTCGCA GGGCTGCGCC ATGGCGCTGA TGGCTGGCTT GCGCCACAAA GAGCGGCTGG CCGGCATTGC GGGCCTGTCG GGCTATTTGC CGCTGGCTGA AAAAACGCTT GCCGAAGGCA GCGCCGCCAA CAAGGACGTG CCGATCTTCC TGGCCCACGG CTCGCGCGAC GGCGTGGTGG CGCTGCCGCG CGCCGTCGCT ACCCGTGACG CGTTGACGGC CATGGGTTAC CCCGTCGAAT GGCATGAGTA CCTGATGGAG CATTCGGTCT GCCCGCAGGA AGTGGCTGAC CTGGAGAAGT GGCTGCTGCG CGTCCTGGCC TGA
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Protein sequence | MSLQIIEAQT GENPVATILI MHGLGADGRD FVPIAEQLDL SSIGPVRFLF PSAPHMPVTI NGGYSMPAWY DILGADLVSR QDEAGMRQTQ ASMEAIIANE KARGIAASRI VVAGFSQGCA MALMAGLRHK ERLAGIAGLS GYLPLAEKTL AEGSAANKDV PIFLAHGSRD GVVALPRAVA TRDALTAMGY PVEWHEYLME HSVCPQEVAD LEKWLLRVLA
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