Gene Pnap_1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1307 
Symbol 
ID4686818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1399239 
End bp1399901 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID639834310 
Productphospholipase/carboxylesterase 
Protein accessionYP_981543 
Protein GI121604214 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.839904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTCC AGATCATTGA AGCCCAGACC GGCGAAAACC CCGTCGCCAC CATTCTCATC 
ATGCACGGCC TGGGCGCCGA CGGGCGCGAC TTCGTGCCGA TTGCCGAGCA GCTCGATTTG
TCGAGCATCG GGCCGGTGCG CTTTTTGTTT CCGAGCGCGC CGCACATGCC GGTGACGATC
AACGGCGGCT ACAGCATGCC CGCCTGGTAC GACATTTTGG GCGCCGACCT GGTCAGCCGC
CAGGACGAAG CCGGCATGCG CCAGACCCAG GCGTCCATGG AAGCCATCAT CGCCAACGAA
AAAGCGCGCG GCATTGCGGC CAGCCGCATC GTGGTCGCCG GTTTCTCGCA GGGCTGCGCC
ATGGCGCTGA TGGCTGGCTT GCGCCACAAA GAGCGGCTGG CCGGCATTGC GGGCCTGTCG
GGCTATTTGC CGCTGGCTGA AAAAACGCTT GCCGAAGGCA GCGCCGCCAA CAAGGACGTG
CCGATCTTCC TGGCCCACGG CTCGCGCGAC GGCGTGGTGG CGCTGCCGCG CGCCGTCGCT
ACCCGTGACG CGTTGACGGC CATGGGTTAC CCCGTCGAAT GGCATGAGTA CCTGATGGAG
CATTCGGTCT GCCCGCAGGA AGTGGCTGAC CTGGAGAAGT GGCTGCTGCG CGTCCTGGCC
TGA
 
Protein sequence
MSLQIIEAQT GENPVATILI MHGLGADGRD FVPIAEQLDL SSIGPVRFLF PSAPHMPVTI 
NGGYSMPAWY DILGADLVSR QDEAGMRQTQ ASMEAIIANE KARGIAASRI VVAGFSQGCA
MALMAGLRHK ERLAGIAGLS GYLPLAEKTL AEGSAANKDV PIFLAHGSRD GVVALPRAVA
TRDALTAMGY PVEWHEYLME HSVCPQEVAD LEKWLLRVLA