Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1216 |
Symbol | |
ID | 4688965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1304545 |
End bp | 1305636 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639834219 |
Product | lytic murein transglycosylase B |
Protein accession | YP_981452 |
Protein GI | 121604123 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.151097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTTC ACACCGCTTC CTTTCACTTC AAGCTTGCTC TGTTTTTAAT AGCTGTCAGT GCAGGCGCAG CAAGCGCAAA GGACGTAAAA TCCTTAAAAA CCAAGGTTTC CGCCAGGGCC GAGCAGGCGC AGGGGCCGCT GTACGCCACG CGCGCCGACG CCATGCAGTT TGCCGACGAC CTGGCCAGCC GCCGCAGCCT TGACCCCGAG TGGGTGCGCC AGGCCATCGG CCAGTCGCGC TTCAACCCCA CGGTGGCGCG GCTGATGCAG CCGCCCACAA AGGCTTTCGT CAAGAACTGG CGCGTCTATC GCAGCCGCTT CATCGACCCG GTCCGCATCC AGGCCGGCGT GAACTTCTGG CAGGCCAACC GCAGCACGCT GGCGCGCGCT GAAAAGGAAT ACGGCGTTCC CCCCGAGATC ATCGTCGGCA TCATCGGTGT CGAAACCATC TACGGCCGCG ACACCGGCAG CTTCCGGGTG ATGGATTCGC TGGCCACGCT GGCCTTCGAC TTTCCGTCCA GCCACCCGCG CGCCCAGGAA CGCAGCGACT ACTTCAAGGG CGAGATCGAG CAGTTCCTGA CCATGGAAAG CCGAAGGAAC GCCGACCCGT TCGAGCCACG CGGCAGCTAC GCCGGCGCCA TGGGCATGCC GCAGTTCATG CCGTCGAGCC AGGCCAAGCA TGCGGTGGAC TTCGACGGCG ACGGCAACAT CGACCTGTGG AACAGCCCGG CCGACGTGAT CGGCTCGGTC GCCAGCTATT TCAAGGCCTA CGGCTGGCAA AGCGGCATGC CGACGCACTA CCCGGTGCGC TTCGACGCCA GCCGGCTGGA CATGGACGCG CTGATGGCGC CCGACATTTT GCCGACCTTC GGCGTCGCCA GCTTCACCGC CAAGGGCGCG GTGCTCGAAG GCCCGGCCTT GGAGCACAAG GGTCCGCTGG CGCTGGTCGA ACTGCTCAAC GGCCCGGACG CGCCCAGCTA CGTGGCCGGC ACCGAGAACT TCTATGTCAT CACGCGTTAC AACTGGAGCA GTTACTACGC GATGGCGGTG ATTGAATTGG GGCGGGAAGT AGCCGGGCGA CTCGCGCCGT GA
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Protein sequence | MTLHTASFHF KLALFLIAVS AGAASAKDVK SLKTKVSARA EQAQGPLYAT RADAMQFADD LASRRSLDPE WVRQAIGQSR FNPTVARLMQ PPTKAFVKNW RVYRSRFIDP VRIQAGVNFW QANRSTLARA EKEYGVPPEI IVGIIGVETI YGRDTGSFRV MDSLATLAFD FPSSHPRAQE RSDYFKGEIE QFLTMESRRN ADPFEPRGSY AGAMGMPQFM PSSQAKHAVD FDGDGNIDLW NSPADVIGSV ASYFKAYGWQ SGMPTHYPVR FDASRLDMDA LMAPDILPTF GVASFTAKGA VLEGPALEHK GPLALVELLN GPDAPSYVAG TENFYVITRY NWSSYYAMAV IELGREVAGR LAP
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