Gene Pnap_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1179 
Symbol 
ID4689934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1256017 
End bp1256985 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content63% 
IMG OID639834183 
ProductHsp33 protein 
Protein accessionYP_981416 
Protein GI121604087 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.863394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC TCCATAAATT TATCTTTGAC GGCCTGCCGG TGCGCGGCAT GCTGGTGCGC 
CTGACCGACT CGTGGCAGGA AATCCTCAAG CGCCGCGAGT CTGCCGGCGG CTACCCGGCC
GAGGTCATGC AGCTGCTGGG CGAAATGACG GCGGCCGGCG CCCTGATGCA AAGCAACATC
AAGTTCAACG GCGCGCTGAT CCTGCAGATT TTTGGCGATG GCCCGGTCAA GCTGGCCGTG
GCCGAGGTTC AGCCCGACCT GAGCCTGCGC GCCACCGCCA CAGTGACCGG CGAGGTGCCC
GAGGGCAGTT CGCTGAGCCA ACTGGTCAAC GTGAAGAACG AAGGCCGCTG CGCCATCACG
CTGGACCCAA AAGACAAGTT TCCGGGCCAG CAGCCCTACC AGGGCGTGGT GCCGCTGTTT
GGCGACCGGC ATGAAAAAAT CGAGAAGCTG AGCGAGGTGC TGGAGCATTA CATGCTGCAA
AGCGAGCAGC TCGACACGCG TTTGATTTTG GCCGCCGACG GCAACGTGGC CGCCGGCCTG
CTGATCCAGC GCCTGCCGGT CAAGGGCCAG GGCAACCTCG AAGGCCAGAT GGACCGCCAG
GCCAATGAAG ACCAGATCGG CGTCAATGAG GACTACCAGC GCATCGCCAT GCTGGCCGGC
ACGCTCAAGC GCGAAGAGTT GCTCACGCTG GATGTCGATA CGATCCTGCG CCGGCTGTTC
TGGGAAGAGC CGATCACGCG TTTCGAGCCG CTAACGCCCA GCTTTGCGTG CAGCTGCTCG
CGTGAGCGGG TGGGCAGCAT GCTGCGCGGC CTGGGCACGG CGGAAATCGA AAGCATCATT
GCCGAGCGCG GCAAGGTCGA TGTGGCCTGC GAATTTTGCG GCGCGCAGTA CGAATTCGAT
CCAGTCGATG CGGCGCAGCT TTTCACCCAG CATATCCAGC AGCAGCCGCC GACCTCGACG
GTGCAGTAA
 
Protein sequence
MSELHKFIFD GLPVRGMLVR LTDSWQEILK RRESAGGYPA EVMQLLGEMT AAGALMQSNI 
KFNGALILQI FGDGPVKLAV AEVQPDLSLR ATATVTGEVP EGSSLSQLVN VKNEGRCAIT
LDPKDKFPGQ QPYQGVVPLF GDRHEKIEKL SEVLEHYMLQ SEQLDTRLIL AADGNVAAGL
LIQRLPVKGQ GNLEGQMDRQ ANEDQIGVNE DYQRIAMLAG TLKREELLTL DVDTILRRLF
WEEPITRFEP LTPSFACSCS RERVGSMLRG LGTAEIESII AERGKVDVAC EFCGAQYEFD
PVDAAQLFTQ HIQQQPPTST VQ