| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1174 |
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| Symbol | |
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| ID | 4690201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1251588 |
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| End bp | 1252490 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834178 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_981411 |
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| Protein GI | 121604082 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.784052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCAC AAAGCCAGTC CAGCATTGAT GCGTTCATCG ACGCCCTGTG GCTCGAAGAC
GGCCTTTCCA GGAACACGCT GGCCGCTTAC CGGCGCGACC TGTCGCTGTA CGCGGGCTGG
CTCCATGCCA AGGAGCAGCA GCACAGAAAG CTCGACGACA CGGACGAGGA CGACCTCAAG
GCCTATTTTT CATTCCGCCA TGCGGCCACC AAGGCCACCT CGGCCAACCG CTGCCTGACG
GTGTTCAAGC GCTACTTTCG CTGGGCGCTG CGCGAAAACC TGATCGCCGC CGACCCGACG
CTCAAGCTCC AGTCGGCCAA GCAGGCTTTG CGCGTGCCCA AGGTCATGTC CGAGGCGCAG
GTCGATGCCT TGCTCGCCGC CCCGGATGAC GACACGCCGC TCGGCCTGCG CGACCGCGCC
ATGCTGGAGC TGATGTACGC CAGCGGCCTG CGCGTGAGCG AACTGGTCGG GCTCAAGACC
TTTCATGTCG GTCTGAACGA AGGCGCGCTG CGCGTCATGG GCAAGGGCAG CGCGGAGCGG
CTGGTGCCTT TCGGCCAGGT GGCGCGCGAG TGGATCGTGC GCTACATCGC CGAGTCGCGA
CCGGCCATCC TGGGCGGCCA GCAGACCGAC GACCTGTTTG TCACCGGCCA CGGCCATGGC
ATGAGCCGGG TGATGTTCTG GATGCTGGTC AAGAAGTACG CGCTGCTGGC TGGCATCCAT
TCGCCGCTGT CGCCGCACAC CCTGCGCCAT GCCTTTGCCA CGCATTTGCT GAACCACGGC
GCCGACTTGC GGGCGGTGCA GATGCTGCTC GGGCATGCCG ACATCTCGAC CACAACGATC
TATACGCATG TGGCGCGCGA ACGCCTGAAG TCGATTCATG CCGAGCATCA CCCGCGCGGC
TGA
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| Protein sequence | MHPQSQSSID AFIDALWLED GLSRNTLAAY RRDLSLYAGW LHAKEQQHRK LDDTDEDDLK
AYFSFRHAAT KATSANRCLT VFKRYFRWAL RENLIAADPT LKLQSAKQAL RVPKVMSEAQ
VDALLAAPDD DTPLGLRDRA MLELMYASGL RVSELVGLKT FHVGLNEGAL RVMGKGSAER
LVPFGQVARE WIVRYIAESR PAILGGQQTD DLFVTGHGHG MSRVMFWMLV KKYALLAGIH
SPLSPHTLRH AFATHLLNHG ADLRAVQMLL GHADISTTTI YTHVARERLK SIHAEHHPRG
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