| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1171 |
|---|
| Symbol | |
|---|
| ID | 4690024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1248815 |
|---|
| End bp | 1249333 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639834175 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981408 |
|---|
| Protein GI | 121604079 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0802] Predicted ATPase or kinase |
|---|
| TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00361416 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTTC CACTGATTGC AGGTCGGCAT CCGCTGATTG TAAAAAACAT GGCCTGGCTA
GATGAGGCCG CCACCGAATC GTTTGCGCGG GCGCTGGCCC GGCGGCCGGC CATTGGCCGC
GCGCTGATCG AGCTGCAAGG CGACCTGGGC AGCGGCAAGA CCACCTTCGT GCGCCACCTG
CTCAAGGGCC TGGGTGTGCA GGGGCGTATC AAAAGCCCCA CCTATGCGGT TGTCGAAGCT
TACACATTGC CTGCAACTGG TCTTGACTCG GGCCACAATC GTGAATTGCT GATCTGGCAT
TTTGATTTTT ACCGTTTCAA CGATCCGCGC GAGTGGGAGG AAGCCGGGTT TCGCGATATT
TTCGCCAGCC CCGGGCTCAA GCTGGTCGAA TGGCCGGAAA AAGCAGGTGA TCATTTACCC
CAGCCCGACC TGGTGATGGC GATTGAGATG TTGCCTGATG AGTCCCGTTT CATCACCCTG
ACGGCCTATA CCCCCACGGG GGCGGAGTTG CTCGCATGA
|
|---|
| Protein sequence | MTVPLIAGRH PLIVKNMAWL DEAATESFAR ALARRPAIGR ALIELQGDLG SGKTTFVRHL
LKGLGVQGRI KSPTYAVVEA YTLPATGLDS GHNRELLIWH FDFYRFNDPR EWEEAGFRDI
FASPGLKLVE WPEKAGDHLP QPDLVMAIEM LPDESRFITL TAYTPTGAEL LA
|
|---|
| |