| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1170 |
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| Symbol | |
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| ID | 4690081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1247259 |
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| End bp | 1248818 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834174 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_981407 |
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| Protein GI | 121604078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0759959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA ACAAGTCTCC CGAGGGTTCG AGTCGCCGCC ATGTCCTGCA AATGGGCGGC
ATCGTGCTGT TGCTCGGCAC TCAGCACATC GCGCGGGGCG CGACCATCGT CGCGGTGCGC
GTCTGGCCGT CCAAGGACTA CACGCGCCTG ACCATCGAGT CCGACACCGA GATCAAGGCG
CGCCAGTTCT TCATTCCCGA GCCGCCGCGC CTGGCGGTCG ATATCGAGGG CATCGATTTG
ATCCCGGCCT TGCGCGAACT GGTGGCCAAG GTCAAGTCCG ATGACCCGAA CATCTCGGGC
ATTCGCGTCG GGCAAAACGC GCCGGGCGTG GTGCGGCTGG TGATGGACCT GAAAAAACCG
ATGCTGCCGC AGGTCTTCAG CCTGGCGCCG GTGGCCGCCT ACCAGCACCG GCTGGTGTTC
GACCTGTACC CGGCGCAGCC GGTGGACCCG CTGGAAGCGC TGATCGCCGA ACGGCTGGCC
GACAACACCG CCAAGCCGGC CGCTGCCGCT CCAGCGCCGG CAGCGCCCAC GGCACCGCCA
CCCGCCATGG CCGCCACGGC GCCGCCGCCG AATCCCACTG CCGGCACGGG CAGCAATGAC
CCGCTGGGCA ACCTGATGGC GCAGCAATCG GGCAAGGCCG CTGCCACGCC CTCGCCTTCC
GCGCCTTTGG CTGCCGTGCC GCCTGCAAGC ATCGCCGCCA ACGCCGGCCG GCCGGTCATT
CCCCGGCCGC CGGTGGTTGC ATCGGTGGAA AAAGAGCGTC CTCCGGTCAA CCTGCCGCCA
CCCAGGCCCC AGGTCGAGGC GCCAAGCTTT TCAGGCAGCG ATTCGGCGCC TGACTTTGGC
AACAAGACCG ACCGACTGGT CATCGTCGCC CTCGACCCGG GCCATGGCGG CGAAGACCCC
GGCGCCATCG GCCCCGGCGG CACGCGTGAA AAGGATGTGG TGCTGCAGAT TGCGCACCGC
CTGCGCGACC GCATCAACCA GCAGCCCAAC ATGCGCGCCT ATCTGACGCG CGACGCCGAT
TTTTTCGTGC CGCTGCATGT GCGGGTGCAA AAGGCGCGCA GCGTGAAGGC CGACTTGTTC
ATCAGCCTGC ATGCCGACGC CTTCTTTACC GAGACACCGC AGGGTGCCAG CGTCTTTGCG
CTGAGCGAAA AAGGCGCGTC CAGCAGCGCG GCACGCTGGA TTGCCGACAA GGAAAACTCG
GCCGACCTGG TGGGCGGCAT CAATGTCAAG GCCAAGGATG CGCAGGTGCA GCGCGCGATG
TTTGACATGA GTACCACGGC GCAGATCAAT GACAGCATGA AGCTGGGCAG CGCCATGCTG
GGCGAGATCG GCAATGTCGG CAAGCTGCAC AAGCCCCGGG TCGAGCAAGC CAGCTTCGCG
GTGCTCAAGG CGCCCGACAT TCCGAGCGTG CTGGTCGAAA CCGCGTTCAT CAGCAACCCG
ATGGAAGAAG CGCGGCTGCG CAGCGACGGC TACCAGATCC AACTGGCCGA TGCGCTGATG
CGCGGCATCT CGCGCTACTT CGCCAAAAAC CCACCGCTGG CACGCAACCG CGCCCTGTAG
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| Protein sequence | MKNNKSPEGS SRRHVLQMGG IVLLLGTQHI ARGATIVAVR VWPSKDYTRL TIESDTEIKA
RQFFIPEPPR LAVDIEGIDL IPALRELVAK VKSDDPNISG IRVGQNAPGV VRLVMDLKKP
MLPQVFSLAP VAAYQHRLVF DLYPAQPVDP LEALIAERLA DNTAKPAAAA PAPAAPTAPP
PAMAATAPPP NPTAGTGSND PLGNLMAQQS GKAAATPSPS APLAAVPPAS IAANAGRPVI
PRPPVVASVE KERPPVNLPP PRPQVEAPSF SGSDSAPDFG NKTDRLVIVA LDPGHGGEDP
GAIGPGGTRE KDVVLQIAHR LRDRINQQPN MRAYLTRDAD FFVPLHVRVQ KARSVKADLF
ISLHADAFFT ETPQGASVFA LSEKGASSSA ARWIADKENS ADLVGGINVK AKDAQVQRAM
FDMSTTAQIN DSMKLGSAML GEIGNVGKLH KPRVEQASFA VLKAPDIPSV LVETAFISNP
MEEARLRSDG YQIQLADALM RGISRYFAKN PPLARNRAL
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