Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1130 |
Symbol | |
ID | 4688058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1202668 |
End bp | 1204002 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639834134 |
Product | glucarate dehydratase |
Protein accession | YP_981367 |
Protein GI | 121604038 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | [TIGR03247] glucarate dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAACCC ATTCCACACC GCTGATCACC GACCTGCAAG TGATCCCCGT CGCCGGCCGC GACTCGATGC TGCTCAACCT GAGCGGCGCG CACGGCCCGT TTTTCACGCG CAACCTGCTG ATCCTCACCG ACAACGCCGG GCGCACCGGC GTGGGCGAGG TGCCGGGCGG CGAGAAAATC CGCCAGACGC TCGAAGATGC CCGTGCGCTG GTCGTCGGCC AGCCAATTGG CGACCACCAG CGCGTGCTGC AGCAGATGCA CCAGCAGTTT GCCGACCGCG ACAGCGGCGG GCGCGGCCTG CAGACGTTTG ATTTGCGCAC CACCATCCAT GCCGTGACCG CCGTCGAGTC GGCGCTGCTC GACCTGCTGG GCCAGCACCT GGGCGTGCCG GTGGCGGCCT TGCTCGGCGA AGGCCAGCAG CGGGGCGCGG TCGAGATGCT CGGCTACCTG TTCTTTGTCG GCGACCGCAC CCAGACCGGC CTGGCCTACA ACAGCGAGCC CGGTGCCGAC AACGCCTGGT CGCGCGTCCG CCACGAAACG GCCTTGACCC CCGAGGCCGT CGTGCGCCAG GCCGAGGCCG CGCACGAGCG CTATGGCTTC AACGACTTCA AGCTCAAGGG CGGCGTGCTG CGCGGCGAGG AAGAAATCGA CGCTGTCACC GCCTTGCACG AGCGCTTCCC GCAGGCGCGC GTCACGCTCG ACCCGAACGG CGGCTGGCTG CTCAAGGACG CGATTCGCCT GATGCGGGAC ATGAAAAACG TCGTCGCCTA CGCCGAAGAC CCGTGCGGCG CCGAAGACGG CTTCTCGGGC CGCGAGGTGA TGGCCGAGTT CCGCCGCGCC ACCGGGCTGC CGACCGCCAC CAACATGATC GCCACCGACT GGCGCCAGCT GACGCACGCG CTGGCGCTGC AGTCGGTCGA TATTCCACTG GCCGACCCGC ATTTCTGGAC CATGGCCGGC TCGGTGCGCG TGGCGCAGAC CTGCCGCGAC TGGGGGCTGA CCTGGGGATC GCACTCAAAC AACCACTTCG ATGTGTCGCT GGCGATGTTC ACCCATGTCG CCGCTGCCGC GCCGGGCCGC GTCACGGCCA TCGACACGCA CTGGATCTGG CAGGACGGCC AGCGCCTGAC GAAGGAGCCG CTGCAGATCG TCGGCGGACT GGTGGCGGTT CCCAAAAAGC CGGGGCTTGG CGTCGAGCTG GACATGGCCG AGGTCGAGAA AGCCCATCAG CTCTACAAGC AGCACGGCCT GGGTTCGCGC GACGATGCCG TTGCCATGCA GTGCCTGATT CCGAACTGGA CCTTCAACCC GAAACGTCCG GCATTTGACA GGTAG
|
Protein sequence | MPTHSTPLIT DLQVIPVAGR DSMLLNLSGA HGPFFTRNLL ILTDNAGRTG VGEVPGGEKI RQTLEDARAL VVGQPIGDHQ RVLQQMHQQF ADRDSGGRGL QTFDLRTTIH AVTAVESALL DLLGQHLGVP VAALLGEGQQ RGAVEMLGYL FFVGDRTQTG LAYNSEPGAD NAWSRVRHET ALTPEAVVRQ AEAAHERYGF NDFKLKGGVL RGEEEIDAVT ALHERFPQAR VTLDPNGGWL LKDAIRLMRD MKNVVAYAED PCGAEDGFSG REVMAEFRRA TGLPTATNMI ATDWRQLTHA LALQSVDIPL ADPHFWTMAG SVRVAQTCRD WGLTWGSHSN NHFDVSLAMF THVAAAAPGR VTAIDTHWIW QDGQRLTKEP LQIVGGLVAV PKKPGLGVEL DMAEVEKAHQ LYKQHGLGSR DDAVAMQCLI PNWTFNPKRP AFDR
|
| |