| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1105 |
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| Symbol | |
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| ID | 4686759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1177213 |
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| End bp | 1179639 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834110 |
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| Product | glycogen/starch/alpha-glucan phosphorylases |
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| Protein accession | YP_981343 |
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| Protein GI | 121604014 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATCCAC CCATTGCCAA GCATGCCCTG GCGGCCCAGA TCGAAGAACA CCTGCTCTGC
ACCGTCGGCG TCGCCTCCGA AGACGCCACG CAAACCGACC TGATGCAGGC CGTCGCCCAG
GTGGCGCGCC AGCAGCTCTC GCAGCGCTGG GTCGAAACCC AGGCGCACCA GCGTGCCGCC
AAGGCGCGCC GGGTGGTGTA TCTGTCGATG GAATTCCTGA TGGGCCGCAC CCTGTCCAAC
GCGCTGGCCG CACTGAACCT GACCGGCGGC GCCGCGCAGG GCCTGATGCA GCATGCGCAA
ACGCTCGAAG ACGTGGCCGA CCGCGAACCC GACGCGGCCC TGGGCAACGG CGGACTGGGC
CGGCTGGCGG CCTGCTTCCT GGATTCGATG GCGACGCTGG GCCTGCCCTC GTTCGGCTAC
GGCATCCGCT ATGAATACGG CATGTTCGCG CAGGACATCC AGGACGGCGC GCAGGTCGAA
TACCCCGACC CGTGGCTGCA GGACGGCACG CCGTGGGAAT TCCCGCGCGC CGGCATCAGC
TACCCGGTGC GTTTCGGCGG CTGGGTTGAG CACCTGAACG GCACGCCGGT CTGGCGCCAC
GCCGGCGAAG TCGCCGCCAA GGCCTACGAC ATGGTGGTGC CCGGCCACGG CACGCCGCTG
GTCAGCACGC TGCGCCTGTG GAAAGCCGTG GCGCCCGCGC ACATCGACCT GGGCGCCTTC
AACACCGGCG ACTACGCTAG AGCCGCCAGC ACCAAAAACG AATTCGAGAA CATTTCCTGG
GTGCTCTACC CCAACGACAG CACGCCGGCC GGGCGCGAGT TGCGGCTCAA GCAGGAATAT
TTCTTTGTCG CCGCGTCGAT ACAGGATCTG GTCAAGCGCC ACCTGGACGA GCACCCGACC
CTTGGCAACC TGGCCGAGCA GGTGGCGATT CACCTGAACG ACACCCATCC GGCCATCGGC
GTGGCCGAGC TGATGCGGCT GCTGTGCGAC GAGCACGGCA TGCCGTGGGC CGAGGCCTGG
GCGCTGTGCG GCAAGACCTT CTCGTACACC AACCACACCT TGATGCCCGA GGCGCTGGAA
ACCTGGCCGG TCGCCTTGAT ACAGCATGTG CTGCCGCGCC ATCTCGAAAT CATCTTCCGC
ATCAACAAGG AATTCCTCGA AATGGCGGCC CGCCACCGGC CCGGCGACAA CGCGTTTTTG
GCGCGCCTGT CGCTGATCGA CGAGCACGGC GAGCGCCGCG TGCGCATGGC GCACCTGTCG
GTGGTCGGCA GCCACAAGGT CAACGGCGTG TCGGCGCTGC ATTCGGATTT GCTGGTGCAG
ACCATCTTTG CCGACTTCGC CGACATCTGG CCCGAGCGCT TTACCAACAT GACCAACGGC
GTGACGCCCC GGCGCTGGCT GGCGCAGGCC AATCCGCAGC TCTCCAGCCT GCTCGACGGC
ACGCTGGGCA GGCAATGGCG GCTGGACCTG GACCAGCTCA AGCGGCTGGA CGAATACCGC
CTTGATGCCG AATTCCAGGG CAGGTTCATG GCCATCAAGC GCGCCAACAA GGCGCGGCTG
GCGGCCTATA TCGAAAAAAC GGCGGGCATC AGCGTCAGCC CCGACAGCCT GTTCGACGTG
CAGGTCAAGC GCATCCACGA ATACAAGCGC CAGCTGCTCA ATGTGCTGCA TGTGGTCACG
CGCTATCAGG CCATATTGGC CAATCCGACG GCCGACTGGG TGCCGCGCAC GGTGATTTTT
GCCGGCAAGG CGGCATCGAG CTACCACACG GCCAAGTCCA TCATCCGGCT GATCCACGAT
GTCGGCAGCG TCATCAACAA CGACCCGCGC ATCGCAGGCA AGCTCAAGCT GGTGTTCGTG
CCCAACTACG GCGTGTCGGT GGCCGAGGTC ATCATGCCCG GCGCCGATCT GTCGGAGCAG
ATTTCGACCG CCGGCACCGA AGCCTCGGGC ACCGGCAACA TGAAGCTGGC GCTCAACGGC
GCGCTGACCA TAGGCACCGA CGACGGCGCC AACATCGAGA TCCGCCAGAA CGTGGGCGAC
GAGAACATCT TCATCTTCGG CCTGAAAACG CCCGAGGTGC ATGCGCTGCG GCAAAGCGGC
TACCAGCCGA TGCGCTACTA CGAAAGCCTG CCGGCGCTCA AAGGCGTGCT CGACGCGATT
GCCGGCGGCC AGTTCTGCCC CAGCGAGCCG GGGCGCTACC GGGCGCTGGT CGATTCGCTG
CTCTGGGGCG GCGACCACTA TTTACTGCTG GCCGATTACG AGTCCTACAT TGCCACCCAG
CTTCGCGTCG ATGCGCTGTA CCGCCAGCCG GCGCAGTGGT GCGAACGGGC GACTGCCAAC
GTCGCGGGCA TGGGCGTGTT TTCGTCGGAC CGGACGATCC GGGAATACGC CAGCCAGATC
TGGAACATTG AGCCTGCCAC GCGCTGA
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| Protein sequence | MNPPIAKHAL AAQIEEHLLC TVGVASEDAT QTDLMQAVAQ VARQQLSQRW VETQAHQRAA
KARRVVYLSM EFLMGRTLSN ALAALNLTGG AAQGLMQHAQ TLEDVADREP DAALGNGGLG
RLAACFLDSM ATLGLPSFGY GIRYEYGMFA QDIQDGAQVE YPDPWLQDGT PWEFPRAGIS
YPVRFGGWVE HLNGTPVWRH AGEVAAKAYD MVVPGHGTPL VSTLRLWKAV APAHIDLGAF
NTGDYARAAS TKNEFENISW VLYPNDSTPA GRELRLKQEY FFVAASIQDL VKRHLDEHPT
LGNLAEQVAI HLNDTHPAIG VAELMRLLCD EHGMPWAEAW ALCGKTFSYT NHTLMPEALE
TWPVALIQHV LPRHLEIIFR INKEFLEMAA RHRPGDNAFL ARLSLIDEHG ERRVRMAHLS
VVGSHKVNGV SALHSDLLVQ TIFADFADIW PERFTNMTNG VTPRRWLAQA NPQLSSLLDG
TLGRQWRLDL DQLKRLDEYR LDAEFQGRFM AIKRANKARL AAYIEKTAGI SVSPDSLFDV
QVKRIHEYKR QLLNVLHVVT RYQAILANPT ADWVPRTVIF AGKAASSYHT AKSIIRLIHD
VGSVINNDPR IAGKLKLVFV PNYGVSVAEV IMPGADLSEQ ISTAGTEASG TGNMKLALNG
ALTIGTDDGA NIEIRQNVGD ENIFIFGLKT PEVHALRQSG YQPMRYYESL PALKGVLDAI
AGGQFCPSEP GRYRALVDSL LWGGDHYLLL ADYESYIATQ LRVDALYRQP AQWCERATAN
VAGMGVFSSD RTIREYASQI WNIEPATR
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