Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1098 |
Symbol | |
ID | 4689537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1167496 |
End bp | 1168161 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639834103 |
Product | hypothetical protein |
Protein accession | YP_981336 |
Protein GI | 121604007 |
COG category | [S] Function unknown |
COG ID | [COG4291] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.184834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.524736 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAAC ATGTTTCTGA AACCACGGGC GTGCAGCGCC TGCTCTCGGG CCTGCTGGCG GGGCTGGCGA CAGCTGCGCT GCCGCTGCCG CTGCCGCTGG TCTGGCAGTT TCGCGGCCTG CTGGGCTGGA GCGTTGGCGT GGCGGTTTAC CTGACGCTGG CCTGGTGGCT GTGCGAGCGC TTTGATGCCG AGCGCACCCG CGAGCGGGCG CAGGCGCAGG ATGAACCCAG CGTGGTGCTG TTCCTGCTGA TGCTGCTGGC GGCAATGGCC TGCGTGGCGG CCATCGTGGT GATGCAGCAG CAGGGCAAGG ATCTGACGGG CACCGAACGC AGCCTGCACA TCGCCGTGTC GGTGGTGGCG CTGATCGCCT CCTGGCTGTT CATCCAGACG ATTTTTGCGT TCCGCTATGC CCACCGCTAT TACCAGGAAG AACAGCGCGG GGAGCCGGGT GGGCCGGGCC TGCTGTTTCC GGGCGGGCTG GAGCCGGACT ATTTTGATTT TTTGTATTAC GCCCATGTGG TCGGCATGAC CTCGCAGGTG TCCGATGTGC AGGTCACCTC GCGCGAGATG CGCCGGCTCA CGCTGGTGCA CAGCGTGCTG TCGTTCGGCT TCAACATGCT GGTGCTGGCG CTCAGCATCA ATGTGGTGGC CGGCGCGCTG CAGTAG
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Protein sequence | MRKHVSETTG VQRLLSGLLA GLATAALPLP LPLVWQFRGL LGWSVGVAVY LTLAWWLCER FDAERTRERA QAQDEPSVVL FLLMLLAAMA CVAAIVVMQQ QGKDLTGTER SLHIAVSVVA LIASWLFIQT IFAFRYAHRY YQEEQRGEPG GPGLLFPGGL EPDYFDFLYY AHVVGMTSQV SDVQVTSREM RRLTLVHSVL SFGFNMLVLA LSINVVAGAL Q
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