Gene Pnap_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1080 
Symbol 
ID4689599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1147992 
End bp1148483 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID639834080 
Productputative nucleotide-binding protein 
Protein accessionYP_981318 
Protein GI121603989 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.240554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAT TCGATACCGT TCTTGAAACC GACCTGGTCA AGGTCAAAAA CGCCGTGGAA 
AACACCGCCA AGGAAATCGG CACCCGCTTT GACTTCAAGG GCACGGCCGC CTCGGCCGAA
CTGAAGGAAA AAGACAAGGA GATCATCCTG ATCGGCGATG GCGATTTCCA GATCGAGCAG
ATCCACGACA TCCTGCGCAA CAAGCTCACC AAGGCCGGCG TCGATGTGCG TTTTCTCGAC
ATTGGCAAGG TCGAGAAAAT CGGTGGCGAC AAGGTCAAGC AGATCACCAA GGTGCGCGAC
GGCATCGAAA CCGAAGAGGC CAAGAAAATC CAGCAGCTCA TCAAGGGCAA CAAGATGAAG
GTGCAGGCCG CCATCCAGGA AGGCAAGGTC CGGGTCACCG GCGCCAAGCG CGACGACCTG
CAGGCCGCGA TGGCCCTGAT CCGCGCCGAG ATCAAGGATT TGCCGCTGAG TTTCGACAAC
TTTCGAGACT GA
 
Protein sequence
MPSFDTVLET DLVKVKNAVE NTAKEIGTRF DFKGTAASAE LKEKDKEIIL IGDGDFQIEQ 
IHDILRNKLT KAGVDVRFLD IGKVEKIGGD KVKQITKVRD GIETEEAKKI QQLIKGNKMK
VQAAIQEGKV RVTGAKRDDL QAAMALIRAE IKDLPLSFDN FRD