| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1068 |
|---|
| Symbol | pepN |
|---|
| ID | 4687527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1132725 |
|---|
| End bp | 1135472 |
|---|
| Gene Length | 2748 bp |
|---|
| Protein Length | 915 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639834068 |
|---|
| Product | aminopeptidase N |
|---|
| Protein accession | YP_981306 |
|---|
| Protein GI | 121603977 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.680993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAA TGATTGATGA TCGCGGAACT GGACCCGGAG CCGTGGTCAT CAACCGCGCC
GACTACCTGG CCCCGGCCTA CTGGATTGAC AGCGTCGATC TGTGTTTTGA CCTGGACCCG
GCAAAAACGC GCGTGCTCAA CAAGATGACG CTGCGCCGCA ACCCGGACGT GCCAGCGCAG
CCGCTCAAGC TGGACGGCGA GGAACTCAAC CTGGCGCGCG TGCTGGTCAA CGGGCAAGGC
ACGTCGTTCA AGATCGAAGG CGGCCAGCTG GTGCTGTGCG ACCTGCCCGA TGCCTTCGAG
CTGGAAATCT TCACCACCAC CTGCCCGTCC AAAAACACCA AGCTGATGGG CCTGTACGTC
AGCAACGACT CGTTCTTCAC GCAGTGCGAA GCCGAGGGTT TCAGGCGCAT CACCTATTTC
CTGGACCGCC CGGACGTGAT GGCCAGCTAC AGCGTCACGC TGCGCGCCGA CAAGGCCAAA
TACCCGGTGC TGCTGTCCAA CGGCAACCTG GTGGCGCATG GCCCGCTCGA AGACGGCCCG
AACGGCGCGC GCCACTTCGC CAAATGGGTC GATCCGCACA AAAAACCCAG CTACCTGTTT
GCGCTGGTGG CCGGCCAGCT GGTCTGCCGC GAGCAGCGCA TCACCTCGCG CGCCGGCAAG
GAGCATCTGC TGCAGGTCTA TGTGCGCCCC GGCGACCTCG ACAAGACCGA GCATGCCATG
GTCTCGCTGA TGCATTCGGT GGCCTGGGAC GAAGCGCGCT TTGGCTTGAG CCTGGACCTC
GAACGCTTCA TGATCGTCGC CACCAGCGAC TTCAACATGG GCGCCATGGA GAACAAGGGC
CTGAATATCT TCAACACCAA GTACGTGCTG GCGAACCAGG CCACGGCGAC CGATGTTGAC
TTTTCAAACA TCGAAAGCGT TGTCGGCCAC GAGTATTTCC ACAACTGGAC CGGCAACCGC
ATCACCTGCC GCGACTGGTT CCAGCTCAGC CTGAAGGAAG GCCTGACGGT GTTCCGCGAC
CAGGAGTTTT CGCAGGATTT GTGCGCCCAG CCTTCAGCCC GCGCCGTCAA GCGCATCGAG
GATGTGCGCG TGCTGCGAAC CGCCCAGTTC CCCGAGGACG CCGGCCCGAT GGCGCACCCG
GTGCGGCCCG ACAGCTACAT CGAGATCAGC AACTTCTACA CCGTCACGAT TTACGAAAAA
GGCGCCGAAG TCGTGCGCAT GATGCAGACG CTGGTCGCGA GCATCAGCGA CCCGCTGGGT
CGGGACGGCT TTGCCCGGGG CATGACGCTC TACTTCGAGC GGCATGACGG CCAGGCCGTG
ACCTGCGACG ACTTTGCGCA GGCCATCGCC GACGCCAATC CGATGTCGGA TCTGGCGCGC
CTGCTGCCGC AATTCAAGCG CTGGTACAGC CAGGCCGGCA CGCCGCGCGT GGAAGCCCTG
GGCGTGTATG ACGCTGCGGC GCGCACTTAC ACCCTGACGC TGTCGCAAAC CTGCTGGCCG
ACGCCGGGCC AGCCGGTCAA GGAGCCGTTT GTGATTCCGG TCGGCCTGGG ACTGCTGGGT
GTTGACGGCC AGGACTTGCC GCTGCAACTG GCGGACGAAC CCTCTGCTAT CGCAGGAACC
CGCACCGTCG TGCTGACGCA GGCCAGCGAA AGCTTCACCT TCGTCAACCT CGACGCCGAA
CCCGTTCCGT CCATCCTGCG CGGCTTCACG GCGCCCGTGG TGCTGGAGTT CGGCTACACC
GACGCCCAGT TGCTGCATTT GCTGGCGCAC GACAGCGACC CGTTCAACCG CTGGGAAGCC
GGGCAGCGCC TGGCGGTCAC CAGCGCCGTA AACGCTATTA AATCTATAGC TACAAGCGCA
GATGGGACAT GCGCAAACGT GCTAAATGAT GCTTATTTAG GCGCCATGCG CGAGGTTTTG
CGCCACCCGA CGCTCGATTC CGCCTTCAAG GACCTGGTGC TGACGCTGCC GTCCGAGACC
TACCTGGCCG AGCAGCTCGA CGTGGTCGAT CCGCAGCACA TCCATGCCGT GCGCGAAGCG
ATGCGCCAGC AACTCGCCAC CGCACTCAAG GCCGACTGGG AAGCGGCGTA TGCAGCCAAC
CACGACACCG GCGCCTACAC GCCCGACCCG GAATCAAGCG GCCGCCGCGC CTTGGCCGGC
ATGGCGCTGA CGCACCTGTG CCTGGCGGCC CGGACCAGCG GCGATGCCGT ATGGCCGGGC
AAGACCTTGC AGCGCTTCAA GGACGCCGGC AACATGACCG ACCGTTTCAA CGCCCTGGCC
GCGCTGGTGT CCAGCAGCCA TGCCCTGGCA GACCAGGCGC TGGCGCTGTT TCACGCCATG
TTCAAGGACG AGGCGCTGGT CATCGACAAA TGGTTCAGCC TGCAGACCAG CGCACCGGAT
CGCGGCGGCA ACATCCTGCC GGCGGTCAAA CAGCTCATGA AGCATGCCGA CTTCAGCCTG
AAAAACCCCA ACCGCGCCCG CAGCGTCATC AGCACCTTCT GCCAGGGCAA CCCGGCCGGG
TTTCACCGGC TCGATGCGGC CGGCTACGAT TTCTGGTGCG AACGCGTGAT CGAGCTGGAC
GCCATCAACC CGCAGGTGGC CGCCCGGCTG GCGCGCGCGC TGGACCGCTG GAGCAAGCTG
GCCGAGCCCT ACCGCAGCAA CGCGCGCCAG GCCATCACGC GTGTCGCCGC CCGCTCCGAC
CTGAGCAAAG ACACCCTTGA AGTGGTGACG CGCGCACTGG GCCAGTAA
|
|---|
| Protein sequence | MLQMIDDRGT GPGAVVINRA DYLAPAYWID SVDLCFDLDP AKTRVLNKMT LRRNPDVPAQ
PLKLDGEELN LARVLVNGQG TSFKIEGGQL VLCDLPDAFE LEIFTTTCPS KNTKLMGLYV
SNDSFFTQCE AEGFRRITYF LDRPDVMASY SVTLRADKAK YPVLLSNGNL VAHGPLEDGP
NGARHFAKWV DPHKKPSYLF ALVAGQLVCR EQRITSRAGK EHLLQVYVRP GDLDKTEHAM
VSLMHSVAWD EARFGLSLDL ERFMIVATSD FNMGAMENKG LNIFNTKYVL ANQATATDVD
FSNIESVVGH EYFHNWTGNR ITCRDWFQLS LKEGLTVFRD QEFSQDLCAQ PSARAVKRIE
DVRVLRTAQF PEDAGPMAHP VRPDSYIEIS NFYTVTIYEK GAEVVRMMQT LVASISDPLG
RDGFARGMTL YFERHDGQAV TCDDFAQAIA DANPMSDLAR LLPQFKRWYS QAGTPRVEAL
GVYDAAARTY TLTLSQTCWP TPGQPVKEPF VIPVGLGLLG VDGQDLPLQL ADEPSAIAGT
RTVVLTQASE SFTFVNLDAE PVPSILRGFT APVVLEFGYT DAQLLHLLAH DSDPFNRWEA
GQRLAVTSAV NAIKSIATSA DGTCANVLND AYLGAMREVL RHPTLDSAFK DLVLTLPSET
YLAEQLDVVD PQHIHAVREA MRQQLATALK ADWEAAYAAN HDTGAYTPDP ESSGRRALAG
MALTHLCLAA RTSGDAVWPG KTLQRFKDAG NMTDRFNALA ALVSSSHALA DQALALFHAM
FKDEALVIDK WFSLQTSAPD RGGNILPAVK QLMKHADFSL KNPNRARSVI STFCQGNPAG
FHRLDAAGYD FWCERVIELD AINPQVAARL ARALDRWSKL AEPYRSNARQ AITRVAARSD
LSKDTLEVVT RALGQ
|
|---|
| |