| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1061 |
|---|
| Symbol | |
|---|
| ID | 4686898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1120192 |
|---|
| End bp | 1121136 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639834060 |
|---|
| Product | transglutaminase domain-containing protein |
|---|
| Protein accession | YP_981299 |
|---|
| Protein GI | 121603970 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.899017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.138464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTACT TGCATCAAAA AGCGCACCCT CTTGAGGCTG CACACCACCA AAGTCCTGAA
GTGTCCGCCA TCTTTGACAT CACCCACACC ACCCATTACC GATATGCCAG TTCGGTCAGG
CTTGGCGAGC ACCTTGTGCA GTTTCGCCCC CGTGACAGCC ATGACCTGCG GGTGCTGGCA
ACCGACATGC GGGTCAACCC TGAGCCGGTG GACATTCGCA TGTTTCAGGA TGCCTACTCC
AATTCCATCG CCCTCATCCA ACCACAAAGC CCGGCGGCCG AACTTCAAGT GGTCTGCTCG
TCTTCGGTCG AACACACCGG CACCCGCGCA GTCAACTTTC CCATGAGCCT GCGGGCACGG
CGGTTTCCGC TGGCTTACGA CGACGAGGAG CGCCTGGTGC TGCGCCATTT CATGACCCCG
TTCTACAACG ACCCCACCGG CATGCTGCAG GCCTGGGCCA ACCAGTTCAT TCGGCCCAAC
GGAGAAACCG GCACACGCGA GCTGCTGGTG GAGATGACCG AATTCATCCG CAACACCATG
CGCTATCAGG CGCGCTTCAG CCGTGGCGTG CAGACGCCCT ATGACACCTT GCGCCTGAAA
AGCGGTGCCT GCCGCGACTT TGCCACACTG ATGATCGAGG CCGTTCGCCG GCTCGGCTAT
GCCGCGCGCT TCGTCTCGGG CTATCTCTAC ACCCCGTGGC GGGACACCGC GAAGCAGCAA
AACATGGGCA ACGGCTCCAC GCACGCCTGG GTACAGGTTT ATCTGCCCGA CGCGGGCTGG
ATTCCGTTCG ACCCCACCAA CAACCTGATC GGCGGCACCG ACCTGATCAG TGTCAGCGTG
GCCCGGCACG CCAGCCAGGC CACGCCGCTC AGCGGATCAT GGCACGGTTA TCCGGGCGAC
TTTCTGGGCA TGGACGTCAA CGTCCAGGTG CGCAAACGGC CTTGA
|
|---|
| Protein sequence | MAYLHQKAHP LEAAHHQSPE VSAIFDITHT THYRYASSVR LGEHLVQFRP RDSHDLRVLA
TDMRVNPEPV DIRMFQDAYS NSIALIQPQS PAAELQVVCS SSVEHTGTRA VNFPMSLRAR
RFPLAYDDEE RLVLRHFMTP FYNDPTGMLQ AWANQFIRPN GETGTRELLV EMTEFIRNTM
RYQARFSRGV QTPYDTLRLK SGACRDFATL MIEAVRRLGY AARFVSGYLY TPWRDTAKQQ
NMGNGSTHAW VQVYLPDAGW IPFDPTNNLI GGTDLISVSV ARHASQATPL SGSWHGYPGD
FLGMDVNVQV RKRP
|
|---|
| |