Gene Pnap_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1017 
Symbol 
ID4690124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1075146 
End bp1076060 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID639834016 
Producthypothetical protein 
Protein accessionYP_981255 
Protein GI121603926 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.221773 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAG CCGCCCCGTC TTGGCCGAGC AAACCGATCA GCCTGATCGT GCCCTTCCCG 
GCGGGCGGGA CGACCGATGT GCTGGCGCGC GCGCTGGGGC TGGAATTGTC CAAGGCGGTC
GGCCAGCCCG TGATCGTGGA GAACAAGCCT GGCGCCGGTG CCACGCTGGG CGCCGATTTC
GTCGCCAAGG CCAGGCCCGA CGGCCACACG CTGCTGATGG GCGCGGTGCA CCACACCATC
GCCACCAGTG TCTATAAAAA ACTGCCCTAT GACTTCCAGA AGAACCTGGC GCCCGTCACC
ACCGTGGCGC TGGTGCCCAA CGTGCTGGTG GTCAATCCGA ACGTGCCGGC CAGGAACGTG
AAGGAACTGC TGGCGCTGGC CAGGGCCGAG CCCGGCAAGC TGACCTATGG CTCCAACGGC
AACGGCACCG GCCAGCACCT GATCGGCGCG CAGTTCGAGG GCATGGGCGG CGTGCAACTG
CTGCATGTTC CCTACAAGGG CAGCGGCCCG CTGACCGTTG ACCTGCTGGG CGGGCAGATC
ACGATGTCGT TCGACACCAT CACGCCGGTG CTGCCGCAAA TCAAGTCCGG CAAGCTCAGG
GCGCTGGCCG TGACCACCAT CAAGCGTTCG CCGGCCTTGC CTGAGGTGCC GACGCTCGAC
GAGGCTGGCC TCAAGGGGTT TGATCTCGGC ACCTGGTTCG GCATCCTGGC CCCTGGCGCC
ACGCCCGGGG AGGTCGTCAC GCGCCTGAAC ACCGAGATGG TGAAAATCAT CAATTCGGCG
GAGTTCCGCA AGAAGATGGC CGACATCGGC GCCGAACCGA TTGGCAACAC GCCCGAGCAA
ATGGCGGCGC AGATCAAGGG CGATACCGAG CGCTTCGCCA AACTGGTGAA GGATGCCAAG
GTCATTATCG AATGA
 
Protein sequence
MAQAAPSWPS KPISLIVPFP AGGTTDVLAR ALGLELSKAV GQPVIVENKP GAGATLGADF 
VAKARPDGHT LLMGAVHHTI ATSVYKKLPY DFQKNLAPVT TVALVPNVLV VNPNVPARNV
KELLALARAE PGKLTYGSNG NGTGQHLIGA QFEGMGGVQL LHVPYKGSGP LTVDLLGGQI
TMSFDTITPV LPQIKSGKLR ALAVTTIKRS PALPEVPTLD EAGLKGFDLG TWFGILAPGA
TPGEVVTRLN TEMVKIINSA EFRKKMADIG AEPIGNTPEQ MAAQIKGDTE RFAKLVKDAK
VIIE