| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1015 |
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| Symbol | |
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| ID | 4686317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1072817 |
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| End bp | 1073752 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834014 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_981253 |
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| Protein GI | 121603924 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0622202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCC CTTCTTCAGC CCCGTCCGAG ATGGCTTTCT TCAGCATGCT GGCCAGGCTC
GGCAGTTTTT CGGCCACGGC GCGCGAACTG GGCATCACCA CGCCAGCCGT CAGCAAGCGC
CTGAGCCAGA TGGAAGCCCG CCTGCGCGTG CAGTTGCTGA ACCGGACCAC GCGCCGCATC
AGCCTCACGC CCGAAGGCGA GACTTACCTG GCGCATGCGC GCCGCATCCT GGCTGACATC
GACGACATGG AGCAGATGGT CTCGGGCGCG GCGTCAGCGC CCAAGGGCCT GCTGCGCGTC
AATGCCACGC TGGGCTTCGG GCGCAGCCAC ATCGCACCGC TGATCTCGGA ATTCATCAAG
CTCCATGCGC AGGTGCAGGT CCAGCTGCAG CTGTCGGTGG ACCCACCGCC GCTGGCCGAG
GACGCTTTCG ATGTTTGCGT GCGCTTTGGC GAGCTGCCTG ATACGCGGGT TCTGGCCCGC
TACCTGGCGC CCAACCGGCG GCTGCTGTGC GCCACGCCGG CCTACCTGGC CAGCCACGGC
ACGCCCAGGG TGCCCAACGA CCTGGCCCAT CACAACTGCA TCGGCATCCG CCAGGGCGGC
GAAGCCTACG GCACCTGGCG CCTTTCCCAG GGCAAGCGCA CGGAAACCGT CAAGGTGCGC
GGCAACCTGA GCACCAACGA CGGCGAAATT GCGGTGAACT GGGCGCTGGA CGGGCACGGC
ATCCTGATGC GCGCCGAATG GGACATTGCC AAATACCTGC GCAGCGGCCG GCTGCTGCAG
GTGCTGGAAA ACTACCGCCT GCCACCGGCC GATATCCATG CGGTTTACCC GCAGCGGCAC
CAAACCTCAG TGCGCGTCAG GGCTTTTGTG GACTTTCTGG CCAGCCATTT TGACCAGCCT
TCCATACGGG CCGAGGGCCT GGCAAGCGCC TGGTAA
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| Protein sequence | MSTPSSAPSE MAFFSMLARL GSFSATAREL GITTPAVSKR LSQMEARLRV QLLNRTTRRI
SLTPEGETYL AHARRILADI DDMEQMVSGA ASAPKGLLRV NATLGFGRSH IAPLISEFIK
LHAQVQVQLQ LSVDPPPLAE DAFDVCVRFG ELPDTRVLAR YLAPNRRLLC ATPAYLASHG
TPRVPNDLAH HNCIGIRQGG EAYGTWRLSQ GKRTETVKVR GNLSTNDGEI AVNWALDGHG
ILMRAEWDIA KYLRSGRLLQ VLENYRLPPA DIHAVYPQRH QTSVRVRAFV DFLASHFDQP
SIRAEGLASA W
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