Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0997 |
Symbol | |
ID | 4687325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1049613 |
End bp | 1050896 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639833996 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_981235 |
Protein GI | 121603906 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACGTC GATTCACCCT CAAGGCGCTC ACCGCCGCCG TCGCCCTGAC CACCCTGTCC GCGCTGCCCG CGTATGCGGC CGAAGACACC ATCAAGGTCG GCATCCTGCA CAGCCTGTCG GGCACCATGG CGATTTCCGA GACCGTGCTG AAAGACACCG TCTTGATGGC GATTGACGAG ATCAATGCCA AGGGCGGCGT GATGGGCAAG AAGCTCGAAC CCGTCGTCGT CGATCCGGCC TCTAACTGGC CGCTGTTCGC CGAAAAGACC AAGCAGCTGC TCGGCCAGGA CAAGGTTTCC GTCATCTTCG GCTGCTGGAC TTCGGTGTCG CGCAAGTCGG TGCTGCCGGT GGTCGAGGAA ATGAACGGCC TGCTGTTCTA CCCGGTGCAG TACGAGGGTG AAGAGCTGAG CAAGAACGTG TTCTACACCG GCGCGGCGCC GAACCAGCAG GCGATTCCTG CCGTCGATTA TTTGATGAGC AAGGCCGGCG GTGGCGCCAA GCGCTGGGTG CTGCTGGGCA CTGACTACGT GTACCCGCGC ACCACCAACA AAATCCTGCG CGCCTACCTC AAATCGAAGG GCGTGGCCGA CAAGGACATC GACGAAAAAT ACACGCCGTT CGGCCATTCG GACTACCAGA CCATCGTGGC CGACGTGAAG AAGTTCTCGC AGGGCGGCAA GACGGCGGTG GTCTCGACCA TCAACGGCGA CTCGAACGTG CCTTTCTACA AGGAACTGGG CAATGCCGGC CTGAAGGCCA AGGACGTGCC GGTCGTGGCG TTCAGCGTGG GTGAAGAGGA ACTGCGCGGC GTGGACACGA AACCGCTGGT CGGCCACCTG GCTGCCTGGA ACTACTTCAT GTCGATCAAG AATCCGACCA ACACCGAGTT CATCAAGAAG TGGAGCGACT ACGCCAAGGC CAAGGGCATC GCCGGCCACA AGGACAAGCC GCTGACCAAC GACCCGATGG AAGCGACCTA TATCGGCATC AACATGTGGA AGCAGGCGGT TGAAAAAGCC AAATCGACCG ACACCGACAA GGTGATTGCC GCCATGGCCG GCCAGACCTT CAAGGCGCCG TCGGGCATCC TGTCGAAGAT GGACGAGAAG AACCACCACC TGCACAAGTC GGTGTTCATC GGCGAGATCA AGGCCGACGG CCAGTTCAAC GTGGTCTGGA AGACGCCCGG CCCGGTGAAA GCCAAGCCAT GGAGCCCGTA CATCGAAGGC AATGCGTCCA AGCCTGACGA GCCGGTCAAG GGCATGAGCG TCGTCAAGAA GTAA
|
Protein sequence | MQRRFTLKAL TAAVALTTLS ALPAYAAEDT IKVGILHSLS GTMAISETVL KDTVLMAIDE INAKGGVMGK KLEPVVVDPA SNWPLFAEKT KQLLGQDKVS VIFGCWTSVS RKSVLPVVEE MNGLLFYPVQ YEGEELSKNV FYTGAAPNQQ AIPAVDYLMS KAGGGAKRWV LLGTDYVYPR TTNKILRAYL KSKGVADKDI DEKYTPFGHS DYQTIVADVK KFSQGGKTAV VSTINGDSNV PFYKELGNAG LKAKDVPVVA FSVGEEELRG VDTKPLVGHL AAWNYFMSIK NPTNTEFIKK WSDYAKAKGI AGHKDKPLTN DPMEATYIGI NMWKQAVEKA KSTDTDKVIA AMAGQTFKAP SGILSKMDEK NHHLHKSVFI GEIKADGQFN VVWKTPGPVK AKPWSPYIEG NASKPDEPVK GMSVVKK
|
| |