| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0978 |
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| Symbol | |
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| ID | 4688202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1027200 |
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| End bp | 1030727 |
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| Gene Length | 3528 bp |
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| Protein Length | 1175 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833977 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_981216 |
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| Protein GI | 121603887 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCCG TCGCCACGCC TTCACCACCG CCGCCTCAAC CGGGCACGCC CACGGGCTCG
CTGGATGAGC GCAGGGGCTC GGGCGCCGAA CCCGAGGTGG CGGTGCAGCG CATCATCAAG
GTCAGGCGCG ACTACAACAG CTGGGTCGCC AGCGAAACGA TGGAAGACTA CGCGCTGCGC
TTCACGCCGC AGCGCTTTCG CAAATGGTCG GAATGGCGCG TGGCCAACAC CGCGTTCGGC
GCGGCCTCGT TCCTGATCCT GGAGGCGGTC GGGGCGACCT TGCTGGTGAA ATACGGCTTC
ACCAATGCCT TCTGGGCCAT CATGGCCACG GGGCTGATCA TTTTCCTGGC CGGCCTGCCG
ATCAGCATTT ATGCGGCGCG CTATGGCGTC GATATGGATT TGCTGACGCG CGGCGCGGGT
TTTGGCTACA TCGGCTCGAC GCTGACCTCG CTGATCTATG CCTCGTTCAC CTTCATTTTC
TTTGCGCTCG AAGCGGCGGT CATGGCCTAC GCGCTGGAGC TTGTCTTCGG CATACCGCCC
AAATGGGGCT ACCTGATCTG CGCGCTGGTG GTGATTCCGC TGGTCACGCA CGGCGTTTCA
ACCATCAGCC GCCTGCAGGT CTGGACGCAA GCCTTGTGGC TGGTCATGCT GGTCGTGCCT
TTTGTGTATG TTTTCATGCT CGCTCCTGGT GCATTTTCAG GGGTCGTTCA GTATGGAGGC
GAGAAGGGAG GCGGTGGTGA CTTCAATTTG CACCTGTTTG GTGCGGCATT GACGGTCGGC
ATCGCATTGA TCACCCAGAT GGGTGAGCAG GCCGACTATT TGCGCTTCAT GCCGGTGCAG
ACCAAGGCCA ATCGCTGGCG CTGGTGGGCC GGGGTGTTCA TCGGCGGGCC GGGCTGGGTG
TTGCTGGGCG TGGTCAAGAT GCTGGGCGGC GCGCTGCTGG CCTACCTGGC GATTTCCAAC
ATGGTGCCGC TGGACCGGGC CGTGGACCCG AACCAGATGT ACCTGGCCGC CTATGAATAT
GTGTTTCCGA ATTACAGCTG GGCCGTGGGC GCCACGGCGC TGTTCGTCGT GGTGTCGCAG
CTCAAGATCA ATGTGACCAA TGCCTATGCC GGCTCGCTGG CCTGGTCGAA CTTTTTCTCG
CGCCTGACGC ACAGCCACCC AGGACGGGTG GTCTGGCTGG TGTTCAACAC CGCCATCGCC
TTCATGCTGA TGGAGATGAA TGTGTTCCAG GCGCTCGGCG AGGTGCTGGG GCTGTACTCG
AACATCGCGA TTGCCTGGGT CATGGCCGTG GTGGCGGACC TGGTCATCAA CAAGCCGCTG
GGCCTGTCGC CGCCGGGCAT CGAGTTCAAG CGCGCCCATC TGTATGACAT CAACCCGGTC
GGCGTGGGCG CCATGGCGCT GGCTTCGCTG CTGTCGATCA CGGCGCATCT GGGGCTGTAT
GGCGAACTGG CACGGGCATT TTCTGCGGTG ATCGCCATGA CGACCGCGTT CGTGGCGGCG
CCGCTGATTG CCTGGGCCAC GAAGGGGCGC TATTACATCG CGCGCCGCTC TGCTTCATCG
GCCGCCGGGG GACTCCACAA GCGCCATGCC ACCCAGCACT GCGTGATTTG CGAACGCAGC
TATGAAGGCC CCGACATGGC GCATTGCCCG GCTTACCAGG GGCCGATCTG CTCGCTGTGC
TGCACGCTGG ACGCGCGTTG CGGCGATTTG TGCAAACCCC ACGCCAGCTT GTCGGCGCAG
TGGTCGGCCG CGCTGCGCTG GCTGCTGCCG CGCCCGGCCT GGCCTTTCCT GGACAACGGG
CTGAGCCACT TTTTGCTGCT GATGGGGGTC ATCGTGCCGT TGCTGGCGAC GCTGTTCGGC
CTGCTGTACC GCCAGGAGAT CAGTTCGCTG GCGGAACTGG CGGCGTCCGA GTCCGCCTTG
CGTTCGGGCT TTTTGAAGGC CTACATGGCG CTGCTGGTGA TTGCCGGGCT GGTGGCCTGG
TGGCTGGTGC TGGCGCACAA GAGCCGGCAG GTGGCGCAGG AAGAATCGAA CCGCCAGACC
CATCTGCTGA TGCAGGAAAT CGAGTCGCAC CGGCAAACCG ATCAGGCGCT GCAGCAGGCC
AAGCGCGTGG CCGACCAGGC CAACCAGGCC AAGAGCCGCT ACATCAGCGC CATCAGCCAC
GAGCTGCGAA CGCCGCTCAA CAGCATCCTG GGCTATGCGC AGCTGATGGG CGAGGACGCA
TCCATTCCGC CGCACCGCCA GCAGGCGGTC AGCGTCATCA AGCGCGGCGG CGAACATTTG
TTGTCGCTGA TCGAGGGCAC GCTCGACATT GCCCGCATCG AGGCCGGCAA GCTCACGCTC
AATGTCAGGC CGATGCAGTT CGCCGACTGC GTGCACGAGG TGGCCGGCAT GTTCGAGTTG
CAGGCGGCCG CCAAGGGCCT GCGCTTTGCT TTTGAAGCTG CAGGCCATCT GCCCGAACTG
GTGCGCGCCG ACGAGCAGCG GGTGCGCCAG GTCTTGATCA ACCTGCTTGG CAACGCCATC
AAGTTCACCG CAGAGGGCCA GGTCACCTTC AGGGTGCGCC ATGCGCGCGA GATGGCCCAT
ATCGACATCG AGGACACTGG CCCCGGAATG AGCGCGGCCG AGCTGGAGAA GATATTCGAG
CCTTTTGCGC GCGGCAGCAC GGCCGGGCAG AGCGTGGGCG GCTCGTCGGG CGCCGGCCTG
GGCCTGACGA TTGCCAAGAT GCTGACCGAC CTGATGGGCG GCGAGATGAC GGTGGTCAGC
ACGCCGGGCA AGGGCTCGGT GTTTCGCATC CGGCTGTTCT TGCCGGAGGT GCATCTGGCG
ACAGCCAGCT TTCCTGCCAC CAAAGTCCGG GATGCCCGGC GCCGGCCGCA GGGCTACGAG
GGCGCGCGCC GCAAGCTGCT GGTGGTGGAC AACGAGGAGC CCGACCGCGA ACTGCTGGTG
CAATTGCTGG CGCCCATGGG CTTCGAGCTG CGCACCGCCG CCAGCGGCCA CGACTGCCTG
GATTTGCTGG CGGCGGGTTA TCGGCCCGAC GTGATCTTCA TGGACCTGGC CATGGCCGGC
ATTGACGGCT GGGAAACATT GCGCCGCGTG CGCAACGCGG GGCATGCCGG CATTCATCTG
GCGATTGTGT CGGCCAACGC CTTTGACAAG GGGCTCGACA ACGACGTGGG CATACGCGCC
GAGGATTTCA TTTTGAAGCC GGTGCGCCAT ACCGAGCTGA TTGACTGGCT GGAGCGCAGC
CTGGGGCTGG CCTGGCGCTA TGACGCCCTG GCAGTGAACC CCGACCCGGT TGCCGCCACG
CCGGCGCCGC GTGTCCTGCC CGATGCGCGC CAGCTTGCCA GCCTGCTGGA AGTGGTCCAT
CTGGGTTTTT ACCGTGGCAT CCTCAACAAG CTGGCGGAAA TTGAAAAGCA GCAACCCGCC
ACAGCTTCCT TTGTCGAGGA GATGCGCCTG ATGGCGCGTC AATTCCGCTT TGAAGCCATG
GCCAGCCAGC TCACACAGAA AGAACCCGGT CATGAACTTG ATGCCTGA
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| Protein sequence | MDAVATPSPP PPQPGTPTGS LDERRGSGAE PEVAVQRIIK VRRDYNSWVA SETMEDYALR
FTPQRFRKWS EWRVANTAFG AASFLILEAV GATLLVKYGF TNAFWAIMAT GLIIFLAGLP
ISIYAARYGV DMDLLTRGAG FGYIGSTLTS LIYASFTFIF FALEAAVMAY ALELVFGIPP
KWGYLICALV VIPLVTHGVS TISRLQVWTQ ALWLVMLVVP FVYVFMLAPG AFSGVVQYGG
EKGGGGDFNL HLFGAALTVG IALITQMGEQ ADYLRFMPVQ TKANRWRWWA GVFIGGPGWV
LLGVVKMLGG ALLAYLAISN MVPLDRAVDP NQMYLAAYEY VFPNYSWAVG ATALFVVVSQ
LKINVTNAYA GSLAWSNFFS RLTHSHPGRV VWLVFNTAIA FMLMEMNVFQ ALGEVLGLYS
NIAIAWVMAV VADLVINKPL GLSPPGIEFK RAHLYDINPV GVGAMALASL LSITAHLGLY
GELARAFSAV IAMTTAFVAA PLIAWATKGR YYIARRSASS AAGGLHKRHA TQHCVICERS
YEGPDMAHCP AYQGPICSLC CTLDARCGDL CKPHASLSAQ WSAALRWLLP RPAWPFLDNG
LSHFLLLMGV IVPLLATLFG LLYRQEISSL AELAASESAL RSGFLKAYMA LLVIAGLVAW
WLVLAHKSRQ VAQEESNRQT HLLMQEIESH RQTDQALQQA KRVADQANQA KSRYISAISH
ELRTPLNSIL GYAQLMGEDA SIPPHRQQAV SVIKRGGEHL LSLIEGTLDI ARIEAGKLTL
NVRPMQFADC VHEVAGMFEL QAAAKGLRFA FEAAGHLPEL VRADEQRVRQ VLINLLGNAI
KFTAEGQVTF RVRHAREMAH IDIEDTGPGM SAAELEKIFE PFARGSTAGQ SVGGSSGAGL
GLTIAKMLTD LMGGEMTVVS TPGKGSVFRI RLFLPEVHLA TASFPATKVR DARRRPQGYE
GARRKLLVVD NEEPDRELLV QLLAPMGFEL RTAASGHDCL DLLAAGYRPD VIFMDLAMAG
IDGWETLRRV RNAGHAGIHL AIVSANAFDK GLDNDVGIRA EDFILKPVRH TELIDWLERS
LGLAWRYDAL AVNPDPVAAT PAPRVLPDAR QLASLLEVVH LGFYRGILNK LAEIEKQQPA
TASFVEEMRL MARQFRFEAM ASQLTQKEPG HELDA
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