Gene Pnap_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0976 
Symbol 
ID4688250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1026039 
End bp1026632 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content66% 
IMG OID639833975 
ProductHupE/UreJ protein 
Protein accessionYP_981214 
Protein GI121603885 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2370] Hydrogenase/urease accessory protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGCA AACCACCTCG CGCTCTTTTT TTAATAGCTG CCTGTGCAAT AGTGACAAGC 
GCAAAAGCCC ATATTGGCAC TGATTTAGGG GTACACGCGG AGATTGGTGT CCTTGACGGA
CTGCTGCATC CCTTCACCGG CCTGGACCAT CTGGCCGCGA TGCTGGCCGT CGGGTTCTGG
AGCGCCTTGA GCGCGCGCCG CCTGTGGACC ACGCCGCTGG CCTTCGCAAG CATGCTGCTG
GCGGGCGCCC TGCTGGGCCT GGCCGGCATG GAACTGCCGG CCGTCGAGCC GATCATTGCC
GCATCGCTGC TGGTGCTGGG CTTGCTGGTG GCCTTGCGCA CGCAGATGCC TGTCGTGCTG
GCAGCGGCGC TCGTCGGCGT GTTTGCGGTG TTTCACGGCG TGGCCCATGG CACGGAGCTG
GCAGGCGCGG CGAACATCGA GGGACCGTTG CTCGGCATGC TGCTCGCGAC GCTCGCGCTG
CACGCCACCG GACTGGGGCT GGGCCTGGCC TTGCGCAACA CCGCCTGGGT TTCACGCATG
GCCGGCGCAG GCGTGGCCAT GCTGGGCCTG ACGCTGTTGA CCCAACTGAC CTGA
 
Protein sequence
MPRKPPRALF LIAACAIVTS AKAHIGTDLG VHAEIGVLDG LLHPFTGLDH LAAMLAVGFW 
SALSARRLWT TPLAFASMLL AGALLGLAGM ELPAVEPIIA ASLLVLGLLV ALRTQMPVVL
AAALVGVFAV FHGVAHGTEL AGAANIEGPL LGMLLATLAL HATGLGLGLA LRNTAWVSRM
AGAGVAMLGL TLLTQLT