Gene Pnap_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0971 
Symbol 
ID4686835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1021978 
End bp1022634 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content63% 
IMG OID639833970 
Producturease accessory protein UreG 
Protein accessionYP_981209 
Protein GI121603880 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC ACCACATCGC CAACCGCACC AAAAAACTGC CGCCCCTTCG CGTGGGCATT 
GGCGGCCCCG TCGGCTCGGG AAAAACCACC CTGCTGGAGA TGCTCTGCAA GGCCATGAAG
GACAAATACG ACCTGGTGGC CATCACCAAC GACATCTATA CCAAGGAAGA CCAGCGCCTG
CTGACCGTCA GCGGCGCTCT GGACGCCGAG CGCATCATGG GCGTGGAAAC CGGCGGCTGC
CCGCACACGG CGATCCGCGA AGACGCCTCG ATCAATCTGG AGGCCATCGA CCGCATGCTG
GTGGAGTTTC CCGATGCCGA CGTGGTGTTC ATCGAGTCCG GCGGTGACAA CCTCGCCGCC
ACCTTCAGCC CCGAACTGAG CGACCTGACC ATCTACGTGA TCGACGTGGC TGCCGGCGAA
AAAATCCCGC GCAAGGGCGG CCCGGGCATC ACCAAGAGCG ATCTGTTCGT CATCAACAAG
ACCGACCTGG CGCCCTACGT GGGCGCCGAC CTGGGTGTGA TGCAGCTAGA TACCATCCGC
ATGCGCACCA CGGCCAAGGG CCTGAAGCCT TTCGTCATGA CCAACCTCAA GACCAACACC
GGCCTGGCCG AGGTGGTGGC CTTCATCGAA ACCAAAGGCA TGCTGCAGCC GGCCTGA
 
Protein sequence
MSLHHIANRT KKLPPLRVGI GGPVGSGKTT LLEMLCKAMK DKYDLVAITN DIYTKEDQRL 
LTVSGALDAE RIMGVETGGC PHTAIREDAS INLEAIDRML VEFPDADVVF IESGGDNLAA
TFSPELSDLT IYVIDVAAGE KIPRKGGPGI TKSDLFVINK TDLAPYVGAD LGVMQLDTIR
MRTTAKGLKP FVMTNLKTNT GLAEVVAFIE TKGMLQPA