| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0946 |
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| Symbol | |
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| ID | 4689122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 997949 |
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| End bp | 999607 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833944 |
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| Product | malonate decarboxylase alpha subunit |
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| Protein accession | YP_981184 |
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| Protein GI | 121603855 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0547141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTAC CAACCGGCAC GCGGTCGTGG GATACCCGCC GAACCGAAAA GAAACGGCGC
CTTGCGCGCG CAGCGGCTTT CACCGACGGC CGCGTGGTGC CCACGGCCGA CATCGTGCCG
TTTCTCGAAT CGCTGATCGC CCCGGGTGAC CGCGTGGTGC TGGAGGGCAA CAACCAGAAG
CAGGCCGACT TCCTGTCGCG CTCGCTGGCC CGGGTTGATC CGGCCAGGGT CAGCGGCCTG
CACATGATCA TTCCAAGCGT CAGCCGGTCT GAGCACCTGG ACCTGTTCGA GCGCGGCATT
GCCCGCAAGC TCGATTTTTC CTATGCCGGC GCGCAGAGCC TGCGCATCTC GCAGCTGCTC
GAAGACGGAC AGCTCGAAAT CGGCGCGATC CACACCTATA TCGAGCTGTA TGCGCGCCTG
TACATCGACC TGACGCCCAA CGTCGTGCTG ATCGCCGGCT TCACGGCCGA CCGTGCCGGC
AACCTCTACA CCGGCGCCAG CACCGAGGAC ACGCCCGCGC TGGTCGAGGC GGCAACCTTT
CGCGACGGCA TCGTGATCGC GCAGGTCAAC GAGATCGTGG ACGACGTGGG CGATTTGCCG
CGCGTCGATA TTCCGGGCTC GTGGATCGAC TTCGTGGTCA AGGCCGACAA GCCGTTCTTC
ATCGAGCCTC TGTTCACGCG CGACCCGCGC CTGATCAAGC CGGTGCATGT GCTGATGGCG
ATGATGGCGA TTCGCGGCAT CTACGAGCGC CACCAGGTGC AGTCGCTCAA CCACGGCATC
GGCTTCAACA CCGCCGCCAT CGAGCTGATT TTGCCGACCT ACGGCGAGTC GCTCGGGCTC
AAGGGCAAGA TCTGCCGCCA CTGGGCGCTC AATCCGCATC CTTCCTTGAT TCCAGCGATC
GAGTCGGGCT GGGTCGAGAG CGTGCATTCC TTCGGTGGCG AACTCGGCAT GGAAAAGTAT
GTCGCGGCGC GGCCCGATGT GTTCTTCACC GGCGCCGACG GCTCGATGCG CTCGAACCGC
GCGCTGTGCC AACTGGCCGG CCAGTACGCG GTGGACTTGT TCATCGGCTC CACCCTGCAG
ATCGACGGCG ACGGCCATTC CTCGACCGTC ACGCGGGGTC GGCTCTCGGG CTTTGGCGGC
GCGCCCAACA TGGGCCATCA GCCCGGCGGC CGCCGCCACA GCACGCCCGC CTGGCTGGAC
ATGCTGCAGA CCGACAGCCC GCTGGAGAAG GGCCGCAAGC TGGTGGTCCA GATGGTCGAA
ACCTTCCAGG CCGGCGGCAA GCCGACCTTT GTCGAGGAAC TCGACGCGGT GCAGGTCGCC
AGGGATTCGG GCATGGCGCT GGCGCCGGTC ATGATTTACG GCGATGACGT GACGCATGTG
CTGACCGAGG AAGGCATTGC CTACCTCTAC AAGGCGCAGT CGCTGGAGCA GCGCAAGGCG
ATGATCGCGG CGGTGGCCGG TGTCACGCCG ATTGGCCTGC GCCATGACCC GGCCCAGACG
CGCCGCATGC GCAGCGAAGG GCTGATTGCG TTGCCCGAAG ACCTGGGCGT GAACCGCGCC
GATGCCACGC GCTCGCTGCT CGCGGCCAAG AGCATGGCCG ATCTGGTGGA CTGGTCCGGC
GGGCTGTACG AGCCGCCGGC CCGGTTCAGG AGCTGGTGA
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| Protein sequence | MQLPTGTRSW DTRRTEKKRR LARAAAFTDG RVVPTADIVP FLESLIAPGD RVVLEGNNQK
QADFLSRSLA RVDPARVSGL HMIIPSVSRS EHLDLFERGI ARKLDFSYAG AQSLRISQLL
EDGQLEIGAI HTYIELYARL YIDLTPNVVL IAGFTADRAG NLYTGASTED TPALVEAATF
RDGIVIAQVN EIVDDVGDLP RVDIPGSWID FVVKADKPFF IEPLFTRDPR LIKPVHVLMA
MMAIRGIYER HQVQSLNHGI GFNTAAIELI LPTYGESLGL KGKICRHWAL NPHPSLIPAI
ESGWVESVHS FGGELGMEKY VAARPDVFFT GADGSMRSNR ALCQLAGQYA VDLFIGSTLQ
IDGDGHSSTV TRGRLSGFGG APNMGHQPGG RRHSTPAWLD MLQTDSPLEK GRKLVVQMVE
TFQAGGKPTF VEELDAVQVA RDSGMALAPV MIYGDDVTHV LTEEGIAYLY KAQSLEQRKA
MIAAVAGVTP IGLRHDPAQT RRMRSEGLIA LPEDLGVNRA DATRSLLAAK SMADLVDWSG
GLYEPPARFR SW
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