Gene Pnap_0916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0916 
Symbol 
ID4689595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp968340 
End bp968654 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content55% 
IMG OID639833914 
Producttransport-associated 
Protein accessionYP_981154 
Protein GI121603825 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATACG TTCGCGCAAT CGCCTTCGCA GCCCTGGCAG GCATCACCAT CATTGGCACC 
GGCTGTGCCG TGGGACGTGG CCAGGAAACA GCGGGCTCGT ATGTTGATGA TGCCGCCATC
ACAACAGCCG TCAAGGCAAA GTTCGTGGAA GACAAAACCG TTTCAGCCAT GTCCATCAGC
GTTGAAACGC TCAATGGCAC GGTGCAACTG TCCGGCTTTG CAAAATCCAC CGCTGAAAAA
ATGCAGGCGG AAAACATTGC CCGTGGCGTG AAGAACGTCA AAAGCGTTCG CAACGACATC
GTCGTTCGCC CTTAA
 
Protein sequence
MKYVRAIAFA ALAGITIIGT GCAVGRGQET AGSYVDDAAI TTAVKAKFVE DKTVSAMSIS 
VETLNGTVQL SGFAKSTAEK MQAENIARGV KNVKSVRNDI VVRP