| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0868 |
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| Symbol | |
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| ID | 4688133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 922105 |
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| End bp | 922839 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639833864 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_981106 |
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| Protein GI | 121603777 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAT CCTTGACTCC AAGCACCGTG GTCACCGGCG CCAGTTCGGG CATTGGCCGG
GCCATCGCCG AGGCCCTGCT GGCGCAAGGC AACAGCGTGG TCAACCTTGA TTACGTTCTG
CCCGACTGGA GCCATCCGCA GCTGGTGTCC TACCAGGCCG ACCTGACGCA GGAAGCATCC
ACCCGCGAGC GCGCTGCCGA GATTGCCGCC CGGCACAACG TGACCGCGCT GGTCAACAAC
GCCGGCGCCA CCCGTCCCGG CACCATCGAC ACCGCGACGA CGGCCTCGCT GGATGACGTG
GTCGGCCTGC ACCTGCGCGC CGTCCTGCTG CTGACGCAGG CCTTTTTGCC GACCCTGCGC
GCCTGCGGCC AGGGCCGCAT CGTCAACATG TCCTCGCGCG CCGCGCTGGG CAAGGTGGAC
CGCATCGTCT ATTCGGCCAC CAAGGCCGGG ATGATCGGCA TGACGCGCAC GCTGGCGATG
GAGTTGGGGC GCGACGGCAT CACGGTCAAT GCGATTGGCC CGGGGCCGAT TGCCACCGAA
CTGTTCCGCA AGAGCAACCC CGAGGGCGCG CCGCAGACCC AGCGCATCCT GGACAGCATT
GCGGTCGGCC GCATGGGCAC GGCAGGCGAC GTGGCGCGCG CCGCCATGTT CTTCCTGTCG
CCCGACAACG GCTTTGTGAC CGGGCAGGTG CTGTACGTCT GCGGCGGCAC CACGCTGGGC
ACCGCGCCGA TCTGA
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| Protein sequence | MTASLTPSTV VTGASSGIGR AIAEALLAQG NSVVNLDYVL PDWSHPQLVS YQADLTQEAS
TRERAAEIAA RHNVTALVNN AGATRPGTID TATTASLDDV VGLHLRAVLL LTQAFLPTLR
ACGQGRIVNM SSRAALGKVD RIVYSATKAG MIGMTRTLAM ELGRDGITVN AIGPGPIATE
LFRKSNPEGA PQTQRILDSI AVGRMGTAGD VARAAMFFLS PDNGFVTGQV LYVCGGTTLG
TAPI
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