| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0864 |
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| Symbol | |
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| ID | 4688091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 918486 |
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| End bp | 919322 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639833860 |
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| Product | beta-ketoadipate pathway transcription regulator |
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| Protein accession | YP_981102 |
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| Protein GI | 121603773 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTG TGCGCACCAA AATCCCCACG GAACCTTCCG GCTCACCTGC GCCAACACGC
ACGTCGCCCG CGCCCGGCGA CAGCTATGTG CAGTCCTTTG CGCGCGGCCT GGAAGTCATT
CGTTCTTTCA GCGCCCGGTC GCCCCGGCAA ACGCTCACCG AAGTGGCCGG TCGCACCGGG
CTGACGCGTG CCGGTGCGCG GCGGATTTTG CTGACGCTGC AAACGCTGGG TTATGTGGAA
AGCGACGGCA AGCTGTTTCG GCTGACGCCG CGCATGCTCG ATCTGGGTTT TGCCTACCTG
TCGTCGCTGC CGATCTGGAA CTTGGCCGAA CCCGTCATGG AAGCGCTCGT CGAGGAAGTG
AAGGAGTCAT GCTCGGCCGC CGTGCTGGAT GGCACCGACA TCGTCTATGT GCTGCGCGTG
CCGACGCACA AGATCATGAG CATCAGCCTG GGCGTCGGTT CGCGGCTGCC GGCCTATTGC
ACGTCAATGG GACGCATGCT GCTGTCAGCC TTGCCGCCGG ACGAAATGAT GCAGGTGCTG
CAAGCGTCAG ACCGCACGGC GCGCACCCGC TACACGGTGA CCGACGTGAA CGAGCTGGCC
GCCAAAATTG CACAGGTTCG CAAGCAGGGC TGGTCGCTGG TCAATCAGGA ACTTGAAGAG
GGATTGATTT CGATGGCGGC ACCGATTACC GACCGCACCG GCCAGACGGT CGCGGCGCTC
AACATCAGCG GCCAGGCCAA TCGCACCAGC GCCAAGGTCA TGCAGGAGAC GATGCTGCCG
CCCTTGCTGG CCGCTGCGCA GGCCATCTCG CAAAGGCTGA GCCTGCAGCG CAACTGA
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| Protein sequence | MATVRTKIPT EPSGSPAPTR TSPAPGDSYV QSFARGLEVI RSFSARSPRQ TLTEVAGRTG
LTRAGARRIL LTLQTLGYVE SDGKLFRLTP RMLDLGFAYL SSLPIWNLAE PVMEALVEEV
KESCSAAVLD GTDIVYVLRV PTHKIMSISL GVGSRLPAYC TSMGRMLLSA LPPDEMMQVL
QASDRTARTR YTVTDVNELA AKIAQVRKQG WSLVNQELEE GLISMAAPIT DRTGQTVAAL
NISGQANRTS AKVMQETMLP PLLAAAQAIS QRLSLQRN
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