Gene Pnap_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0813 
Symbol 
ID4686419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp856598 
End bp857605 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content58% 
IMG OID639833810 
Productprotein kinase 
Protein accessionYP_981053 
Protein GI121603724 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGG TCAAGCCTTC ATCCCTGCCG CCTGACACTG TCATCGGAGG CTACCGCGTT 
GTGCGAAAGC TTTCGGCGGG TGGATTCGGT GTAGTTTACT TGGCCGTTGA CAATGAGGGC
CAGCAGTTCG CCATCAAGGA GTACTTGCCG TCCTCTCTGG CCAGCCGGGC GGTGGGCGAG
TTGCTGCCGC AGGTTCTGCC GGAAAAGCTT TCGCTCTACC GCCTGGGCCT CAAGAGTTTT
TTTGAGGAAG GCCGTTCGCT GGCCCAGATT TCGCATGGCT CGGTGGTGAG CGTGCTGAAT
TTCTTTCGCG AGAACGAAAC CGTTTACATG GTCATGAACT ACCTGGAGGG TGGAACCCTG
CAGGACTTCA TCATCACGGC GCGCGACCTG AAAAAACCCA AGGTGTTCCG CGAATCGACC
ATTCGTTCGC TGTTTGACGA AATCCTGCGC GGACTGCGCA TCGTGCACCA GCACAAGATG
CTGCACCTGG ACATCAAACC GGCCAACATC TTCATCACCG ATGACAACCG GGCCGTGATG
ATCGACTTTG GCGCAGCCCG CGAGGTGCTG AGCAAAGAGG GCAATTTCAT CCGGCCGATG
TACACCCCCG GCTTTGCAGC CCCCGAAATG TACCGGCGCG ATTCTTCGAT GGGCCCCTGG
ACCGACATCT ATGCCATCGG CGCCTGCATG TACGCCAGCA TGCAGGGCTA CCCGCCCAAT
GACGCGCCGC AGCGCCTCGA AAAAGACCGG CTGTCGCTGG CCTTGTCCAG GCTGCGCGGC
GTGTATTCCG ACAACCTGAT TGAAGTCGTT GAATGGTGCA TGTCGCTCGA TCCGCTGTCG
CGGCCGCAGT CCGTGTTTGC CCTGCAAAAA GAACTGAGCC GGGAAAGCGA GCGTCACTAC
ACCAAGCTCA CTGTCAGCGA AAGGGTTCGC CTGCAGTTTG ACAGCGTGGT GTCCGATACC
AAGAAAACGG TACGCAAAGC CAACGCATTC GGAACCCGCT CCAAATGA
 
Protein sequence
MSKVKPSSLP PDTVIGGYRV VRKLSAGGFG VVYLAVDNEG QQFAIKEYLP SSLASRAVGE 
LLPQVLPEKL SLYRLGLKSF FEEGRSLAQI SHGSVVSVLN FFRENETVYM VMNYLEGGTL
QDFIITARDL KKPKVFREST IRSLFDEILR GLRIVHQHKM LHLDIKPANI FITDDNRAVM
IDFGAAREVL SKEGNFIRPM YTPGFAAPEM YRRDSSMGPW TDIYAIGACM YASMQGYPPN
DAPQRLEKDR LSLALSRLRG VYSDNLIEVV EWCMSLDPLS RPQSVFALQK ELSRESERHY
TKLTVSERVR LQFDSVVSDT KKTVRKANAF GTRSK