Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0809 |
Symbol | |
ID | 4686055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 852358 |
End bp | 854595 |
Gene Length | 2238 bp |
Protein Length | 745 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639833806 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_981049 |
Protein GI | 121603720 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGT CCGTCGTTCC CCGCAAGCCA ACACCCGCCG CAGCCAACGC TGCGGCGGCC AGTTTTGCCG CGTTGACCGC CAAACTCGAC TACCTGAGTG CTGCAGACAT TGAACATGTC CGCCAGGCCT ACCGCTTCGC CGATCAGGCC CATCTGGGAC AACTGAGAAA CAGTGGCGAG CCCTATATCA CCCATCCCAT CGCAGTGGCC CAGCAGTGCG CCGAATGGAA ACTCGATGCC CAGGCCCTGA TGGCGGCGCT GCTGCACGAT GCCATTGAAG ACTGCGCAGT CACCAAGCCG GAACTGATCG AGCGCTTTGG CGCACCCGTG GCTGAGCTGG TGGATGGCCT GACCAAGCTG GAAAAGCTGG AGTTCAACAC CCGCGAAGAA AATCAGGCGG AGTCCTTCCG CAAGATGCTG CTGGCCATGG CGCGCGACGT TCGCGTCATT CTGATCAAGC TGGCGGACCG CATGCACAAC ATGCGAACGC TGAGCGATGC GCCGCGCTCC AAATGGAAAA GAATCGCCAG TGAAACGCTG GATATTTACG CGCCGATTGC GCACCGCCTG GGCCTGAACT CGACCTATCG CGAGTTGCAG GACCGATCAT TTCAGCACCT GCATCCGTGG CGCTATGCCA TCCTGACCAA AGCCCTGACA CGGGCGCGGG GCCGCCGGCG TGACGTCATC AAACGCGTGC AATCCGAAGT CGAGGCAGCC TTTGCCAGCG CACAGATTGC GGTTCGGGTC TATGGACGCG AGAAAACGCT GTACTCGATT TACCACAAGA TGGACCAGAA GCATTTTTCT TTTGCACAGG TCACTGATCT TTACGGTTTT CGGGTGATCT TGCCGGACGT GACGGCCTGC TACAGCGCCA TGGGCATCCT GCATCAGCTC TACAAGCCCT TGCCGGGCAA GTTCAAGGAC TACATCGCCA TTCCCAAGGT CAACGGCTAC CAGTCGCTGC ACACCACGCT GGTCGGGCCT TTCGGAACCA ACATCGAATT CCAGATGCGT ACCGATGCCA TGCATGTCGT GGCAGAGGCG GGCGTGGCGG CCCACTGGCT GTACAAGGCG TCTGATCCGA ACAGCGACAC CTCGCAGCGG CTGGGAACCA AATGGCTGCA GTCATTGCTC GATATCCAGC AGGAAACCCA TGATGCCGCC GAGTTTTGGG ATCATGTCAA GATTGACCTG TTTCCAGAAG CGGTTTACGT CTTCACCCCC AAAAGCCAGA TCATGGCGAT GCCGCGTGGC GCCACCATCG TGGACTTCGC CTACGCCATT CACAGCGATG TGGGCCACCA TGCGATTGCG GCCAAGGTCA ATGGCGAACA GGTCACGCTG CGTACCGAAC TGCTCAACGG CGATGTCATA GAAGTCATCA CCTCTCCCGT TTCCACGCCC AATCCGGCCT GGCTGGGATT CGTTCGAACC GGCAAGGCTC GCTCGAAGAT CCGGCACTAT CTCAAGAGCA TGGCGCTCAC GGAATCGCAA GAACTGGGTG AAAAAATGCT GGCTCAGGCA TTGCGGGCCG AAGGCATAGA CCGGCAACGC CTTTCAGCGG ATGATGGAGC GCATCACGCC AAGTGGGAAA AAATCCTGCG TTTTACGGGC AACCGTTCAC GCGCCGAATT GCTGACCGAC ATTGGCATGG GCAAGCGCAT CGCCAGCATG ATTGCCAAAC GCATTGTGAC TTTTCTCGCT GAAGATGGTG AAAAACCCGA TGCCTTGCTG ATGAGCCGGG AACGCTACAT TCCACACGAG TCAGTCTCGC AAGGTGGCCT GGTGCTCGAT GGCAGCGAAG GCGGTTCAGT CCAGTTTGCG CGATGCTGCT GCCCGATTCC CGGTGATGGA ATCGTGGGCT ATCTGGGGCG GGGCGAAGGG CTTTTTGTCC ATACCGACGA CTGTGCCGTG GCCAAGCGCC TGCAGCAACG CGACAGCGAA CGGTTCATCG CCGTTGATTG GTCGGATGAA CCCGCCCGCA CCTTTGAAAC CAATCTTCTG GTGACGGTTT CGAATGGTAA AGGGGTACTG GCAAAAGTGG CAACGGCCCT TGCCGGTGCT GAAGTTGACA TTACCCATGT GGACATGGGG CATGAGCCTG CGAACGGTGC AACCGACCTG CGATTTACCG TGGCTGTACG CGACCGTATT CACCTGGCTG CAGCGATGCG CAATGTCAGG CGCACGCAAG CGGTGCTTCG GGTTCAACGG GTCAAGGCAA GCGCTTGA
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Protein sequence | MPTSVVPRKP TPAAANAAAA SFAALTAKLD YLSAADIEHV RQAYRFADQA HLGQLRNSGE PYITHPIAVA QQCAEWKLDA QALMAALLHD AIEDCAVTKP ELIERFGAPV AELVDGLTKL EKLEFNTREE NQAESFRKML LAMARDVRVI LIKLADRMHN MRTLSDAPRS KWKRIASETL DIYAPIAHRL GLNSTYRELQ DRSFQHLHPW RYAILTKALT RARGRRRDVI KRVQSEVEAA FASAQIAVRV YGREKTLYSI YHKMDQKHFS FAQVTDLYGF RVILPDVTAC YSAMGILHQL YKPLPGKFKD YIAIPKVNGY QSLHTTLVGP FGTNIEFQMR TDAMHVVAEA GVAAHWLYKA SDPNSDTSQR LGTKWLQSLL DIQQETHDAA EFWDHVKIDL FPEAVYVFTP KSQIMAMPRG ATIVDFAYAI HSDVGHHAIA AKVNGEQVTL RTELLNGDVI EVITSPVSTP NPAWLGFVRT GKARSKIRHY LKSMALTESQ ELGEKMLAQA LRAEGIDRQR LSADDGAHHA KWEKILRFTG NRSRAELLTD IGMGKRIASM IAKRIVTFLA EDGEKPDALL MSRERYIPHE SVSQGGLVLD GSEGGSVQFA RCCCPIPGDG IVGYLGRGEG LFVHTDDCAV AKRLQQRDSE RFIAVDWSDE PARTFETNLL VTVSNGKGVL AKVATALAGA EVDITHVDMG HEPANGATDL RFTVAVRDRI HLAAAMRNVR RTQAVLRVQR VKASA
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