| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0802 |
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| Symbol | |
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| ID | 4690037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 844323 |
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| End bp | 846089 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639833799 |
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| Product | ABC transporter related |
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| Protein accession | YP_981042 |
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| Protein GI | 121603713 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCAA GACGTTATGG ACTCTGGGCG CTCATCGTGG TGCTTGTTGG CGTGGCCGTG
CTGCCGCTGC CCGATTTCTG GATCACCCAG CTCAACTACA TTGGCCTGTA CAGCCTGGTC
TGCCTGGGGC TGGTTCTGCT GACCGGCGTG GCCGGGCTGA CCTCCTTCGG CCAGGCCGCA
TTTGTCGGCA TCGGCGCTTA CTCGACCGCC TGGCTGACGC TCAACACCGG CCTGTCGCCG
TGGCTCACGC TGTTCATCGG CCTGGGGCTG ACGGCGGCCT GCGCGCTGAT CCTGGCTTTG
CTCACGCTCA GGATGTCGGG ACACTACCTG CCGCTGGCCA CCATGGCCTG GGGCCTGTCG
CTCTACTACC TGATGGGCAA CCTTGACGCG CTGGGCAAAT ACGATGGCCT GCTGGGCATC
CAGGGCCTCA CGCTGCTGGG CTGGGAAGTC GGCCAGGGGC GCGGCTTTTT TGCGCTGACC
TGGACCATCG TCGTGCTGGC GGCGCTGGCC ATCGTGCAGC TGCTCGACTC CCGGGCAGGG
CGGGCGATGC GGTCGCTGCG CAGCGGCACG CTGATGGCCG AGGCCATGGG CGTGTCCACG
CTGCGCTACA AGATCATCAT TTTCCTGATT GCCGCACTGC TGGCGTCCCT CTCGGGCTGG
CTCTTTGCGC ACTTTCAGCG CACCGTCAAC CCCTCGCCCT TCGGGCTGAA GATGGGCATC
GAGTACCTGT TCATGACGGT GGTCGGCGGC GTCGGCCATG TCTGGGGCGC GCTCACCGGC
GCGCTGCTCA CCAAGCTGCT CGAAGACCAG CTCCAGGTGC TGCTGCCCCA GTGGCTGGGC
ACCAGCGGCA GCTATGAAAT CATTGTGTTC GGCATCGTGC TGGTGCTGAT GCTCAAGTTC
CTGCCCGATG GCCTGTGGTC CTTCGTGGAT CGGCGCGTGC CCCGCGCCAG GCGCAAGGAA
GACTGGGCCG GCGCCCCCGA TCTGCCCGCG CGCGCCAAGC CGGAGCAGGG CGAACTGGTG
CTCGACGTGC AGGCCATCCG CAAGGAGTTT GGCGGGCTGG TCGCGGTCAA GGACATCAGT
TTCCAGATCC GCGCTGGCCA GATCGTCGGC CTGATTGGAC CGAACGGTGC CGGCAAATCG
ACCACCTTCA ACCTGATCTC TGGCGTGCTG TCTCTCACCA GCGGCAATGT GGTGTTTCGC
GGCGAGAAAA TCGGCGGCCT GCGTTCACGG GAGATTGCGG CACGCGGCAT GTCGCGCACC
TTTCAGCACG TCAAGATGAT TCCCGACATG ACCGTGCTGG AAAACGTCGC CCTGGGCACC
CACCTGCGCG GCACCAAGGG CGTGGTGTCG GCCATGACCC GGCTCAACCG CAGCGAAGAA
CAGCAGTTGT TCCGCGAAGC CCAGCGCCAG CTTGAGCGCA TTGGCATGGG TGCTTTTCTG
CATGAGCAGG CCGGCAACCT GGCGATGGGG CCGCAGCGCC TGATGGAAAT TGCCCGCGCC
CTGTGCAGCG ATCCGGCCCT GCTGCTGCTC GACGAGCCGG CCGCCGGCCT GCGCCACCAG
GAAAAGCTGG CCCTGGGCGG TGTGCTGCGC CAGCTGCGCG CCGAAGGCAT GAGCATCTTG
CTGGTCGAGC ATGACATGGA CCTGGTCATG GGCATCTGCG ACCACCTGGT CGTGATGGAG
TTCGGCACCT ACCTGACCGA AGGCACGCCG GCCTTCATTC AGCAAAGCCC CGCCGTGCGC
GCCGCCTACC TCGGCACGGA ACATTAA
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| Protein sequence | MLARRYGLWA LIVVLVGVAV LPLPDFWITQ LNYIGLYSLV CLGLVLLTGV AGLTSFGQAA
FVGIGAYSTA WLTLNTGLSP WLTLFIGLGL TAACALILAL LTLRMSGHYL PLATMAWGLS
LYYLMGNLDA LGKYDGLLGI QGLTLLGWEV GQGRGFFALT WTIVVLAALA IVQLLDSRAG
RAMRSLRSGT LMAEAMGVST LRYKIIIFLI AALLASLSGW LFAHFQRTVN PSPFGLKMGI
EYLFMTVVGG VGHVWGALTG ALLTKLLEDQ LQVLLPQWLG TSGSYEIIVF GIVLVLMLKF
LPDGLWSFVD RRVPRARRKE DWAGAPDLPA RAKPEQGELV LDVQAIRKEF GGLVAVKDIS
FQIRAGQIVG LIGPNGAGKS TTFNLISGVL SLTSGNVVFR GEKIGGLRSR EIAARGMSRT
FQHVKMIPDM TVLENVALGT HLRGTKGVVS AMTRLNRSEE QQLFREAQRQ LERIGMGAFL
HEQAGNLAMG PQRLMEIARA LCSDPALLLL DEPAAGLRHQ EKLALGGVLR QLRAEGMSIL
LVEHDMDLVM GICDHLVVME FGTYLTEGTP AFIQQSPAVR AAYLGTEH
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