| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0800 |
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| Symbol | |
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| ID | 4687047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 842059 |
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| End bp | 843192 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639833797 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_981040 |
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| Protein GI | 121603711 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.552204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA AAAAAACCTT CATCGCCACC GCATTCACCC TGCTGGCCTG CGGCACCGCG
CTGGCTGACA TCACCATCGG CGTGAGCCTG CCGCTGACCG GCCCCGCCTC TGGCCTGGGC
ATTCCGGTGA ACAACCAGAT GAAGCTGTGG CCCAGCACCA TCGGCGGTGA AAAGGTCAGG
CTCATCATCC TGGACGATGC CACCGATCCG ACCAACGGCA CCAAGAACGC CAAGCGCTTC
GTGACCGATG ACAAGGTGGA CATCATCATC GGCTCGGTCG CCACGCCGGT GGCCATTCCG
ATTGCCGACG TGGCCGCAGA GTCGAAAACC GTGCAGCTGT CGCTCTCGCC CATTCAGCTG
CCGCCAGGCA AGGATGGCTG GACCTTCCGC ATGCCGCAAT CCAACGCCGT GATGTCGCAC
GCCATGATGG GCCTGATGAA AAAGCAGGGC GTCAAGACCG TCGGCTTCCT GGGCTACACC
GATGCCTATG GCGAAGGCTG GCTCAAGGAC TTCACCGCCG AGGCCGAAAA GAACGGCATC
AAGGTCATCG CCACCGAGCG CTTCGCACGC TCGGACACCA GCGTGACCGG CCAGGTGCTC
AAACTGGTGG CCGCCAACCC CGATGCAATG CTGATCGTCG CCTCGGGCAG CGGCGCGGCC
ATGCCGCACA TGGCGGTGGT CGAGCGCGGC TACAAGGGAA AAATCTACCA GACGCACGCT
GCCGCCACGC GTGACCTGAT GCGCGTGGGC GGCAAGGCGG TGGAAGGCGC CTATGTGGTG
TCCGGCCCGG CCGTGATTGC CGAGCAGTTG CCTGACAGCC ATCCGTCCAA GAAAGCCGCC
ATCGACTTTG TGCAGAAGTT CGAGAAAGCC TATGGCCCCG GTTCGCGCAA CCAGTTTGCC
GGCCATGGTT ATGACGCCGA ACTGGTGCTC GAAAAAATCG TTCCCATGGC GCTCAAGAAA
GCCAAGCCCG GCACGCCGGA ATTCCGCGCA GCGCTGCGCG ACGCCATGGA AACCATGGGC
CGCAGCGTGG TGGCGCATGG CGTGGTGAAC TGGACTAAGG ACGACCACTG GGGCTACACG
CCTGAAACCG GCGTGATGCT CAAGGTGGTC AACGGCGACT GGAAAGTCGA ATAA
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| Protein sequence | MKLKKTFIAT AFTLLACGTA LADITIGVSL PLTGPASGLG IPVNNQMKLW PSTIGGEKVR
LIILDDATDP TNGTKNAKRF VTDDKVDIII GSVATPVAIP IADVAAESKT VQLSLSPIQL
PPGKDGWTFR MPQSNAVMSH AMMGLMKKQG VKTVGFLGYT DAYGEGWLKD FTAEAEKNGI
KVIATERFAR SDTSVTGQVL KLVAANPDAM LIVASGSGAA MPHMAVVERG YKGKIYQTHA
AATRDLMRVG GKAVEGAYVV SGPAVIAEQL PDSHPSKKAA IDFVQKFEKA YGPGSRNQFA
GHGYDAELVL EKIVPMALKK AKPGTPEFRA ALRDAMETMG RSVVAHGVVN WTKDDHWGYT
PETGVMLKVV NGDWKVE
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