Gene Pnap_0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0789 
Symbol 
ID4686377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp832296 
End bp833117 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content59% 
IMG OID639833785 
Producthistidine kinase 
Protein accessionYP_981029 
Protein GI121603700 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.57147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATC GTTTTAATTT TGACGTGAAA TCAAAAGCAT TAACGAGAGT CGGGGGCCGG 
GCGGCATGTC GCCAGATTTG TGGCCTGCAG CCTTCAGCGC AAGCATTTGC GGTTGACGGG
GCGGTGGGAC TCACCGAAGC GGCACGGCTC TTGGAGGAGC GCCGCGCCTT CGCCGTGGCA
GCCAACGCCA TCCGTGAGGA AGAAAAATCC CGCCTGGCCC GTGAACTGCA CGATGAGCTT
GCACAGTCGC TGACGGCATT GAAGATGGAT GCTATCTGGG TTCGCGACCA GGCAGACGCC
TGGCCTGCAA TGGTTGCTGC AAAGCTGACC GACATGGTGG AAATGCTTGA CCGGACGGTT
GCCGCGACAC GCCGCATGGC CGCCGATTTG CGGCCGCTGC TGCTCGATGA CCTGGGCTTG
GCGCCGGCCA TCGAATGGCT CGCAAGCAGC TTTATGCAGC GCTGCGGTAT TCCCTGCAGG
CTGTCGATCA ACGGGGGACT GGGCTTGGAA CTGCCGGAAC CTTATGCGAC TGCTGTGTTC
CGGATCGTTC AGGAGTCACT GAATAATATT GCCAAACATG CCGCTGCCTC GCAAGTGGTG
GTGACTTTGG ACCAGACGCT GGATACGGTA AAACTGGTGG TGCAGGACGA TGGTTGTGGA
TTCTTTTCCA CTGCAGAACG CAAGCCGCAA TCGTTGGGGC TCATGGGTTT GCGCGAGCGC
GCGCAACTGC TCGGTGGATG TGTCGCTATC CGCAGCACAC CCGGGCAGGG TACCTGCATT
GAGGTCAGCA TTCCCCTGGA CCCCATGGGA GCCTGCGGAT GA
 
Protein sequence
MKNRFNFDVK SKALTRVGGR AACRQICGLQ PSAQAFAVDG AVGLTEAARL LEERRAFAVA 
ANAIREEEKS RLARELHDEL AQSLTALKMD AIWVRDQADA WPAMVAAKLT DMVEMLDRTV
AATRRMAADL RPLLLDDLGL APAIEWLASS FMQRCGIPCR LSINGGLGLE LPEPYATAVF
RIVQESLNNI AKHAAASQVV VTLDQTLDTV KLVVQDDGCG FFSTAERKPQ SLGLMGLRER
AQLLGGCVAI RSTPGQGTCI EVSIPLDPMG ACG