Gene Pnap_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0720 
Symbol 
ID4689516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp760930 
End bp762063 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content57% 
IMG OID639833715 
Producthypothetical protein 
Protein accessionYP_980960 
Protein GI121603631 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.49556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.409913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATA AAAAGGAACA GAATTTGCTT ATATTGGCTG TCTGGAATTT TCTGGCAGCG 
GCTATTTCAT TTTGTTTGCG ATCCCATACT ATGTCACCCC TTCTTCCTGC GCCAGTAGCG
CTTTCCTCTG AAGGTCATGC CTCGCGCCGT CAAATCCTTC GCTCGAGCCT GGCATGTGGG
CTGAGTTGCG GACTGGGACT GGGCAGCAAC GCACTCGCGC AAAATGCCAA GCCTGCGTGG
CCCGTTCGGC CCATCCAGAT GATCGTGCCA TGGCCTGCTG GCGGCGCGAC TGACCTGACA
CTGCGCGTAC TCAATGAAGA AGCAGAACCC TTGCTTGGAC AGCGTATCGT GGTGGTTAAC
CGGCCCGGGG CTGCCGGCAC CCTGGTGGCG CCTCTGCTCA AGGCGGCAGA TCCTGACGGA
TACACCATCG GGCAAATACC GATCACGGTG TACAGATACG CACTCATGAA CCGGGTTCCC
TGGGACCCGG TTCATGATTT GACGCCCATC CTGCAAGTGT CCAGCACCAC CTTCGGCTTG
CTGGTTCCTG CCGACAGTCC CTGGAAAAGC CTGGCCGATC TGATTAACTG GGCGCGTGAA
AATCCCGGCC AACTCTTGAT GGGCTCAACC GGCATAGGCA CCACGGCCCA TCTGGCCATG
GAAGAAATAC TGCTCGAAAA TAACATCAGC TATGGCCATA TACCCTACAA AGGCACGACC
GAGCAAATGC TGGCCATCGC TTCAGGCCAG TTGATGGCGG GGGTCAATTC CACTGGCTTT
GCTCCTTGGG TCGATCAACA CAAAATACGG CTTCTGGCCA TTTTCAGCGC TGAGCGCAGC
GCCCGCTGGC CGCAGGTACC CACGTTGCGC GAACTGGGCT ACGAGCGTTC GGTTTACACC
TCGCCATGGG GATTGGGTGC CCCCCGTGGC ACCCCGTCTG CCATCGTTCA GCTTTTGCAC
AATGCCTTTC ACAAAGCCAT TTTCAGCCCG AATCACAAAG CCGCGCTGGC CCGCTACGAC
CAGGACATCA ACTACCTCGA CACAGCCGCC TACCAACTGG CCATCAGCGA AACCGTAAAG
CACGAAAAAG CGCTGCTTGC CCGCATGAAG TTGCTGGCGG TGCCGCTTTC ATGA
 
Protein sequence
MPNKKEQNLL ILAVWNFLAA AISFCLRSHT MSPLLPAPVA LSSEGHASRR QILRSSLACG 
LSCGLGLGSN ALAQNAKPAW PVRPIQMIVP WPAGGATDLT LRVLNEEAEP LLGQRIVVVN
RPGAAGTLVA PLLKAADPDG YTIGQIPITV YRYALMNRVP WDPVHDLTPI LQVSSTTFGL
LVPADSPWKS LADLINWARE NPGQLLMGST GIGTTAHLAM EEILLENNIS YGHIPYKGTT
EQMLAIASGQ LMAGVNSTGF APWVDQHKIR LLAIFSAERS ARWPQVPTLR ELGYERSVYT
SPWGLGAPRG TPSAIVQLLH NAFHKAIFSP NHKAALARYD QDINYLDTAA YQLAISETVK
HEKALLARMK LLAVPLS