Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0720 |
Symbol | |
ID | 4689516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 760930 |
End bp | 762063 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639833715 |
Product | hypothetical protein |
Protein accession | YP_980960 |
Protein GI | 121603631 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.49556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.409913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAATA AAAAGGAACA GAATTTGCTT ATATTGGCTG TCTGGAATTT TCTGGCAGCG GCTATTTCAT TTTGTTTGCG ATCCCATACT ATGTCACCCC TTCTTCCTGC GCCAGTAGCG CTTTCCTCTG AAGGTCATGC CTCGCGCCGT CAAATCCTTC GCTCGAGCCT GGCATGTGGG CTGAGTTGCG GACTGGGACT GGGCAGCAAC GCACTCGCGC AAAATGCCAA GCCTGCGTGG CCCGTTCGGC CCATCCAGAT GATCGTGCCA TGGCCTGCTG GCGGCGCGAC TGACCTGACA CTGCGCGTAC TCAATGAAGA AGCAGAACCC TTGCTTGGAC AGCGTATCGT GGTGGTTAAC CGGCCCGGGG CTGCCGGCAC CCTGGTGGCG CCTCTGCTCA AGGCGGCAGA TCCTGACGGA TACACCATCG GGCAAATACC GATCACGGTG TACAGATACG CACTCATGAA CCGGGTTCCC TGGGACCCGG TTCATGATTT GACGCCCATC CTGCAAGTGT CCAGCACCAC CTTCGGCTTG CTGGTTCCTG CCGACAGTCC CTGGAAAAGC CTGGCCGATC TGATTAACTG GGCGCGTGAA AATCCCGGCC AACTCTTGAT GGGCTCAACC GGCATAGGCA CCACGGCCCA TCTGGCCATG GAAGAAATAC TGCTCGAAAA TAACATCAGC TATGGCCATA TACCCTACAA AGGCACGACC GAGCAAATGC TGGCCATCGC TTCAGGCCAG TTGATGGCGG GGGTCAATTC CACTGGCTTT GCTCCTTGGG TCGATCAACA CAAAATACGG CTTCTGGCCA TTTTCAGCGC TGAGCGCAGC GCCCGCTGGC CGCAGGTACC CACGTTGCGC GAACTGGGCT ACGAGCGTTC GGTTTACACC TCGCCATGGG GATTGGGTGC CCCCCGTGGC ACCCCGTCTG CCATCGTTCA GCTTTTGCAC AATGCCTTTC ACAAAGCCAT TTTCAGCCCG AATCACAAAG CCGCGCTGGC CCGCTACGAC CAGGACATCA ACTACCTCGA CACAGCCGCC TACCAACTGG CCATCAGCGA AACCGTAAAG CACGAAAAAG CGCTGCTTGC CCGCATGAAG TTGCTGGCGG TGCCGCTTTC ATGA
|
Protein sequence | MPNKKEQNLL ILAVWNFLAA AISFCLRSHT MSPLLPAPVA LSSEGHASRR QILRSSLACG LSCGLGLGSN ALAQNAKPAW PVRPIQMIVP WPAGGATDLT LRVLNEEAEP LLGQRIVVVN RPGAAGTLVA PLLKAADPDG YTIGQIPITV YRYALMNRVP WDPVHDLTPI LQVSSTTFGL LVPADSPWKS LADLINWARE NPGQLLMGST GIGTTAHLAM EEILLENNIS YGHIPYKGTT EQMLAIASGQ LMAGVNSTGF APWVDQHKIR LLAIFSAERS ARWPQVPTLR ELGYERSVYT SPWGLGAPRG TPSAIVQLLH NAFHKAIFSP NHKAALARYD QDINYLDTAA YQLAISETVK HEKALLARMK LLAVPLS
|
| |