Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0691 |
Symbol | |
ID | 4689995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 738437 |
End bp | 739396 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639833685 |
Product | ABC transporter related |
Protein accession | YP_980931 |
Protein GI | 121603602 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.711895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.844705 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGCCA TCTCATTTCA GTCTGTCTCC AAAACCTATC CCCCCGCGCG AAACCAACCC GCCACCGGCC TGAAAGCACT GGACAGCGTC AGCTTCGACA TCCAGCAAGG CGAATTCTTC GGTCTGCTGG GCCCCAACGG CGCCGGTAAA ACCACCCTCA TCAGCATCCT GGCCGGCCTG TCGCGCGCCA GCAGCGGCCG GGTTCTGGTG CATGGCAGTG ATGTCGTGCT GGACTACGCC AATGCCCGGC GCAAGCTCGG CATCGTGCCG CAGGAACTGG TGTTCGACCC TTTCTTCACC GTGCGCGAAG CCTTGCGCAT CCAGTCGGGC TATTTCGGCA TCAAGCGCAA CGACGACTGG ATTGACGAGT TGCTGGCCAG TCTGGGTCTG GCCGACAAGG CCGATGCCAA CATGCGCCAG CTCTCGGGCG GCATGAAGCG CCGCGTGCTG GTGGCGCAGG CGCTGGTCCA CAAGCCGCAG GTTATCGTGC TCGACGAGCC CACGGCCGGC GTCGATGTGG AGTTGCGCCA GACTTTGTGG CAGTTCATCG CCAAACTCAA CAAGCAAGGC AGCACGGTGC TGCTGACCAC TCACTATTTG GAAGAAGCCG AAGCCCTGTG CAGCCGCATT GCCATGCTCA AGCAGGGCAG GGTGGTGGCG CTGGCCCAGA CTTCCGAGCT GCTCAGTGCC GCCTCCAGCA ATGTGCTGCG CTTTAAAATT GATAGCGAAC TTCCATTGCA CCTTGCGCGC CAGGCACGCA TTACAGGCCG AATCGTGCAG TTTCCGGCGC ACAATGCGCG CGAAATCGAG CAGTACCTGG CCGCCGTCCG CGAGGCCGGC CTGGTGGCCG AGGACGTGGA AATCCGCAAA GCCGACCTGG AAGACGTGTT TCTCGATGTG ATGAACGAAA AAGATGTGAA AGAACCCATG GCGATGGACC TTGCCGGAGC CATGAAATGA
|
Protein sequence | MPAISFQSVS KTYPPARNQP ATGLKALDSV SFDIQQGEFF GLLGPNGAGK TTLISILAGL SRASSGRVLV HGSDVVLDYA NARRKLGIVP QELVFDPFFT VREALRIQSG YFGIKRNDDW IDELLASLGL ADKADANMRQ LSGGMKRRVL VAQALVHKPQ VIVLDEPTAG VDVELRQTLW QFIAKLNKQG STVLLTTHYL EEAEALCSRI AMLKQGRVVA LAQTSELLSA ASSNVLRFKI DSELPLHLAR QARITGRIVQ FPAHNAREIE QYLAAVREAG LVAEDVEIRK ADLEDVFLDV MNEKDVKEPM AMDLAGAMK
|
| |