| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0674 |
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| Symbol | |
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| ID | 4689583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 717000 |
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| End bp | 717674 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639833668 |
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| Product | pilus assembly protein, PilO |
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| Protein accession | YP_980914 |
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| Protein GI | 121603585 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.214156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAAA TTTCCAGACC CGCTATCGAT TTCGCGGCCC TTCAAGGCCG CATCCAGAAC
CAATTTACCG GTCTTGATCC CAATGATCCG GCTTCTTGGC CCAGCTTTCC CCGTTACCTG
CTATGCGCTG CCGTGACCGT CGCGGTTGTG GTCGCGCTCT GGTTTATGTG GTTGAGCGCT
TCTGATGAAG AACTGACGGC AGAAAAAGCC AAGGAAGTCC AGCTGAGGCA AAGCTATACC
AGCAAGTTGA CACAGGCTGT CAATCTGGAG GTTTTGAAGA AGCAGCGTGA GCAAGTCCAG
CAGTATGTGA CGCAGCTTGA AAAACAGTTG CCCAGCAAAG CTGAAATGGA TGCATTGCTT
TCCGATATCA ACCAGGCCGG TTTGGGTCGC AGCCTTCAGT TTGAACTGTT CCGGCCAGGT
CAGGTGCTTG TGAAGGATTA CTACGCTGAG TTGCCCATTT CGGTACGGGT GACGGGTGGC
TATCACGATA TAGGCGCTTT TGCTGCTGAT ATTGCCAACC TCTCCCGCAT TGTGACGTTG
AACAATATTG CCATTAACCC TGCGAAAGAT GGCAATCTGG TTATGGACGC CACGGCAAAA
ACCTTCCGCT ACCTGGACAA TGAAGAAATC GCCTTGCAGC GCAAGAGTGT TTCGTCCACT
GGGGCAAAAA AATGA
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| Protein sequence | MVKISRPAID FAALQGRIQN QFTGLDPNDP ASWPSFPRYL LCAAVTVAVV VALWFMWLSA
SDEELTAEKA KEVQLRQSYT SKLTQAVNLE VLKKQREQVQ QYVTQLEKQL PSKAEMDALL
SDINQAGLGR SLQFELFRPG QVLVKDYYAE LPISVRVTGG YHDIGAFAAD IANLSRIVTL
NNIAINPAKD GNLVMDATAK TFRYLDNEEI ALQRKSVSST GAKK
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