Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0659 |
Symbol | |
ID | 4688621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 699292 |
End bp | 699978 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639833653 |
Product | hypothetical protein |
Protein accession | YP_980899 |
Protein GI | 121603570 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000868215 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00174594 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCAGCG ATAGTCATTT TTTGAAAGAG CGCCTCGCCG AAGCGGCCCG CTATGCACTC ATGCGCCGGC TGCTGCCGGC CATCCGCCAT AACCTGGCCG GTTCGCTGCA GCCCATCGGC ATGATGTCGG CCATGCTGGA ACGGCGGATC AAGTCAGCTG CGCCCGATAT GGCGCAGCTT GGCAAGAACA CGCAGGCCCT GACCACCCTG TCCCGCGAAG CCGTGGCCAC TTCCCAGAAC CTGATGGCCT GGCTGGGTCC CAGGGACAAC GATGTGGTGG CGCTGAACGG CGCGGTTGAA GAGTCCCTGG GGCTGATGTC CACCGAACTC TCCTTTCGCG GGTTCTGCGT CGTCAACCAG ACCGCCGAGG TGTCGGCCGA GTTGCCCAAA GGCATTCTGC GCAGCGTTTT CACCGCCAGC CTGATCGCCC TGACCGACTC GGTCGAGGAA GCGGCCAGCG TGGTGGTCAG CGCTGCGGGC GAGGCGGGCG ACACCCGATT GAAAATCGCG ATAGAGCCAG GCGGCATGGC TGAGCTTGCA TCAATGGGAA GCCGGATGCC GACCTATCGC CTCCTGCAAT GGGCCGATGT TCAGGCGCTC GCTGATGCGG AAGGCGTGCA TCTGGACTAT GCGCCCGACT TCGTGCAACT TGATTACTGC GCCGCAGCCA CTGTGTTGAC CCGTTGA
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Protein sequence | MSSDSHFLKE RLAEAARYAL MRRLLPAIRH NLAGSLQPIG MMSAMLERRI KSAAPDMAQL GKNTQALTTL SREAVATSQN LMAWLGPRDN DVVALNGAVE ESLGLMSTEL SFRGFCVVNQ TAEVSAELPK GILRSVFTAS LIALTDSVEE AASVVVSAAG EAGDTRLKIA IEPGGMAELA SMGSRMPTYR LLQWADVQAL ADAEGVHLDY APDFVQLDYC AAATVLTR
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