| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0650 |
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| Symbol | |
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| ID | 4687869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 688495 |
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| End bp | 689604 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639833644 |
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| Product | porin |
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| Protein accession | YP_980890 |
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| Protein GI | 121603561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000349197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.162286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CCCTCATTGC TTTCGCAGCC CTCAGCGCAA TCGCTGGCAT GGCACAAGCC
CAATCTTCCG TCACCTTGTA CGGCCTCGTT GACGCCTATG TCGGTCAAAC GTCGAAGGAA
GTCACAAGCA CGATTCCAGG CGTGGCATCA GCTAAATTGA AGCAAACCGC AGTCAATGGC
AGCGGTCAGA ACAACTCCCG TTGGGGCCTG AAAGGCACTG AAGACCTCGG TGGCGGCATG
AAGGCTTTGT TCGTTCTTGA AGGCGGTTTC CAGCCTGACA CGGGTGCGAA TGCCACCATT
TCCAACCAGG GCGGCGGCTT GTTCGGTCGT CAGGCATGGG TTGGCTTGTC AAGTGGTTTT
GGTACCGTTA GCCTGGGTCG TCAATACACG GCTTACGACG CTCTGCGCGG CGCAACCAAC
ATGATTTATG ACTCCAACTT TGCGACCACC AGCACTGTTT GGGGCACGGG CATTGCTGAC
TACCAAAACC GCGCAAGCAA TTCCGTCGCT TACACATCGC CAGACTTCGC TGGTTTCAGC
GGCTCCGTTG TTTACGGCGC TGGTGAAAAC AAGACGGCTA CAACGGATGC TGAAAGCAAC
ACCAGCTTGA TGATCAAATA CGCCAACGGC CCTCTGCTGG TTGGTTTTGC ACACCAGCGT
GAAAAGCAAG TTGCTAGCAC AGTTGGCAAC TACTTCGGCT CCGGTGCAAC TGTTGGCGTG
GCTGCTGGTC CTGTCGCGTT TTCCAGCACC CGCAAGTACA ACCTGCTCGG CGCTTCCTAT
GACTTCGGCG TTGCCAAGGT CACTGGCCAG TACAACGAAG CCAAAGGCGA AATTGGTCTG
ACCACTTCGG CCAAAGACAA GGAATTTGAT GTTGGCGTGA GCGTGCCGTT TGGCGCTGCT
GCCGTTGCTG CTGGTTACAG CCGTTCGAAG AGCGATGCCA GCAACAACAC CCACAACAAG
GGCACCGGCG TGAGCTTGCT GGGCACCTAT GCACTGTCCA AGCGCACCAA CCTGTACACG
GGTTTCCTGG TGACCAAGGT TCAGTCTTCA AATGCCGCTA CCGAAACCAA GGCTTCGACC
TTCGGTCTGG GCGTCAAGCA CCTGTTCTGA
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| Protein sequence | MKKTLIAFAA LSAIAGMAQA QSSVTLYGLV DAYVGQTSKE VTSTIPGVAS AKLKQTAVNG
SGQNNSRWGL KGTEDLGGGM KALFVLEGGF QPDTGANATI SNQGGGLFGR QAWVGLSSGF
GTVSLGRQYT AYDALRGATN MIYDSNFATT STVWGTGIAD YQNRASNSVA YTSPDFAGFS
GSVVYGAGEN KTATTDAESN TSLMIKYANG PLLVGFAHQR EKQVASTVGN YFGSGATVGV
AAGPVAFSST RKYNLLGASY DFGVAKVTGQ YNEAKGEIGL TTSAKDKEFD VGVSVPFGAA
AVAAGYSRSK SDASNNTHNK GTGVSLLGTY ALSKRTNLYT GFLVTKVQSS NAATETKAST
FGLGVKHLF
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