Gene Pnap_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_0621 
Symbol 
ID4686452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp658482 
End bp658904 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content63% 
IMG OID639833615 
ProductHxlR family transcriptional regulator 
Protein accessionYP_980861 
Protein GI121603532 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG TTGACCTTCA CGCAGGTGAA ATCGCCACCC TCGCCGACCA GTTGCGCCGG 
GGATCGTTGT TTTCCGTGGA ATGCCCCTCC AGAGAGGTGC TCAAGCATGT GACCAGCCGC
TGGGGCGTAC TGGTGCTGGT CGCTCTGGGC GGCGGCACGC ATCGTTTCAG CGACCTGCGC
CGCAAGGTGG GGGGCGTGAG CGAAAAAATG CTGGCCCAGA CCCTGCAATG CCTGGAGAGT
GATGGTTTTG TGGATCGAAA GTCTTATCCG GTGGTGCCGC CCCATGTCGA ATACAGCCTC
ACGCCGCTTG GCGAGGAAGT GGCTCGCCAG GTCGAAGCGC TGGCGGACTG GATTGAAGGC
AACCTGCCGC GCATCATGGA TGCGCGCCGC CTGCAGGCGC GCAGCCCCTT CAGCAAGCCC
TGA
 
Protein sequence
MNDVDLHAGE IATLADQLRR GSLFSVECPS REVLKHVTSR WGVLVLVALG GGTHRFSDLR 
RKVGGVSEKM LAQTLQCLES DGFVDRKSYP VVPPHVEYSL TPLGEEVARQ VEALADWIEG
NLPRIMDARR LQARSPFSKP