| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0543 |
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| Symbol | |
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| ID | 4689205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 571073 |
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| End bp | 573112 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833538 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_980784 |
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| Protein GI | 121603455 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.266344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCAA CCAACCCCAG CGCCGCGCCT GCGGCCTTTG AGTCGCCCCT GGACACGGCG
CTGCTCTCGC GCATGGCAAC GGCGCTGTTT GCCGCCTTGC CGGGCGAGGT GGCCGCGCCG
GCAGGCCTGC ATTCCGCCGC TGGCCTGCCT TCGACGCCGC CAGCATCGTT GCCCGGTTTG
CCGGCGACGC CACTGGGCGT GCAGGCGCCG CTGCAACTCG CGCCAGCCGG ATCGCCGCTG
GCCAGCCCGG CGGGCTTTGG CCCCGGTGTG CCGGGCACCC CGATTCCGCA AGGCCAGATA
CCGGGCGCCA ACCTGATTCC GGCATCCCCT GCGCAGGTGC CGTCGCTGGG CAACCGTGCG
CCCGCGCTGC TGCCGCATGC GGTCGCGGGC AACGGCGTGC CCGACAAACT GGTGAGCGCC
GTGCCGGCCT ACGAACCACG CCTGGCCGGC GCGACGATTG GTGTGCCTGA AGCATCCGCG
GCCACGGTGT CGCAAGCCGG ACGGAACCCG GCGGCAAACG CTGTTCCGTT CTATTTTCTC
GGTGACCAGC ACGGCCATCC GTCGCCCGGC GGGCGTGATG CCCGTGTCGT ACCAAGCCAG
GGCGGCAGCC TTGATTCGCT GGCGACCTTG CCGTTTGAGC AGCCGGCCGT TCCCGCCTTG
GCCGCGCCTG CCGCGCCTGT CCATGCGCCC GAGGCCGCGT CCGGCCAGCC CAAGTTCTAT
TTCGTCGATT CGGTGGTGTT GCCCAGTGGC TATGTGACGC CCGCCAAGCC CGCGCCGCAT
GCGGTCGAGC CGCTGGCGGG CCGCTCGGCG CATCCGGCTT TCGATGTGCA GGCGGTGCGC
CGCGATTTCC CCATCCTGCA GGAGCGCGTC AATGGCCGCC AGCTGGTCTG GTTCGACAAC
GCCGCCACGA CGCACAAGCC GCAGTCGGTG ATCGACCGCG TCTCGTATTT TTACGAGCAC
GAAAACTCCA ACATCCACCG CGCCGCCCAT GAACTCGCCG CCCGCGCCAC CGACGCCTAC
GAAGGCGCGC GAGAGCGGGT CAGGAAGTTC ATCAACGCCC CGGACGTGAA CGAGGTGATC
TTCGTGCGCG GCACCACCGA GGCCATCAAC CTGGTGGCCA AGAGCTGGGG CGGGCAGCAT
GTCGGTGAAG GCGATGAAAT CATCGTCAGC CACCTGGAGC ACCACGCCAA CATCGTGCCC
TGGCAGCAGC TCGCTGCCGC CAAGGGCGCC AAGCTACGCG TGATTCCGGT GGACGACAGC
GGGCAGGTGC TGCTCGATGA ATACGGCAAG CTGCTCAACG ACCGCACAAA AATCGTCGCT
GTCACGCAGG TGTCCAACGC GCTGGGCACC GTGGTTCCCG TCAAGGAAAT CGTGGCGATG
GCGCACCGGG CCGGCGCCAA GGCGCTGGTC GATGGTGCGC AGGCGATTTC GCACATGCGC
ATCGACGTGC AGGACATCGG CGCCGATTTC TTTGTGTTCT CCGGCCACAA GGTGTTCGGC
CCGACCGGCA TCGGCGTGGT CTGGGGCAAG CGCGAAGTGC TGGAGGACAT GCCGCCCTGG
CAGGGCGGCG GCAACATGAT CGCCGACGTG ACGTTCGAGA AAACCGTGTT CCAGCCGATT
CCAAACAAGT TTGAAGCCGG CACCGGCAAC ATCGCCGACG CCGTGGGCCT AGGCGCGGCC
ATCGACTACG TGAGCCGCGT GGGCATCGAG AACATTGCCC GCTACGAGCA CGAACTGCTG
TGCTACGGCA TGCAGCACCT GGGCGAGATC AAGGGCGTTC GCCTGATCGG TACGGCCAGC
GACAAGGCCA GCGTGATGTC TTTTGTGCTG GCGGGCTACA CCACCGAGGA AGTGGGCAAG
GCGCTCAACG ACGAGGGCAT TGCCGTGCGC ACCGGCCACC ACTGCGCGCA GCCGATTTTG
CGGCGGTTCG GGGTCGAAAC CACGGTGCGG CCTTCGCTGG CGTTTTACAA CACCTTTGGC
GAGATTGACC GACTGGTCGC CGTGGTGAAG CGGCTGGCGG ACCAGCGGCG CACGTTTTAA
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| Protein sequence | MLATNPSAAP AAFESPLDTA LLSRMATALF AALPGEVAAP AGLHSAAGLP STPPASLPGL
PATPLGVQAP LQLAPAGSPL ASPAGFGPGV PGTPIPQGQI PGANLIPASP AQVPSLGNRA
PALLPHAVAG NGVPDKLVSA VPAYEPRLAG ATIGVPEASA ATVSQAGRNP AANAVPFYFL
GDQHGHPSPG GRDARVVPSQ GGSLDSLATL PFEQPAVPAL AAPAAPVHAP EAASGQPKFY
FVDSVVLPSG YVTPAKPAPH AVEPLAGRSA HPAFDVQAVR RDFPILQERV NGRQLVWFDN
AATTHKPQSV IDRVSYFYEH ENSNIHRAAH ELAARATDAY EGARERVRKF INAPDVNEVI
FVRGTTEAIN LVAKSWGGQH VGEGDEIIVS HLEHHANIVP WQQLAAAKGA KLRVIPVDDS
GQVLLDEYGK LLNDRTKIVA VTQVSNALGT VVPVKEIVAM AHRAGAKALV DGAQAISHMR
IDVQDIGADF FVFSGHKVFG PTGIGVVWGK REVLEDMPPW QGGGNMIADV TFEKTVFQPI
PNKFEAGTGN IADAVGLGAA IDYVSRVGIE NIARYEHELL CYGMQHLGEI KGVRLIGTAS
DKASVMSFVL AGYTTEEVGK ALNDEGIAVR TGHHCAQPIL RRFGVETTVR PSLAFYNTFG
EIDRLVAVVK RLADQRRTF
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