Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_0506 |
Symbol | |
ID | 4687001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 535905 |
End bp | 537137 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639833502 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_980748 |
Protein GI | 121603419 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAG AGCTTGTTAC AAATTCACCC CTGTCTGACC GTGTAAAGAC GGCGCTGGCC GTCTCCCTGC GGGGCTGCGA CGAGCTGATT CCGCAGGACG AATGGACCCG CAAACTGGTC CGCAGCGAAG CCACCGGCGT GCCGCTGCGC ATCAAGCTGG GGCTGGACCC GACCGCGCCC GACATCCACA TCGGCCACAC CGTGGTGCTC AACAAGATGC GCCAGTTGCA GGACCTGGGC CACACGGTGA TCTTCCTGAT TGGCGACTTC ACCAGCCTGA TTGGCGATCC GTCGGGGCGC AACAGCACGC GCCCGCCGCT CACGCCCGAG CAGATCAAGG TGAACGCCGA AACCTATTAC CGCCAGGCCA GCCTGGTGCT GGACCCGGCC AAAACCGAGA TTCGCTACAA CAGCGAATGG TGCGACCCGC TGGGCGCGCG CGGCATGATC CAGCTCGCTT CGCGCTACAC CGTGGCGCGC ATGATGGAGC GCAACGACTT TCACGACCGC TTCAAGGCCG GCCAGTCGAT CAGCGTGCAT GAATTCTTGT ACCCGCTGAT GCAGGGCTAT GACTCGGTGG CGCTCAAGAG CGACCTGGAA CTCGGCGGCA CCGACCAGAA GTTCAATTTG CTGATGGGCC GGCATCTGCA GCAGGAATAC GGCCAGGAGC CGCAGTGCAT CCTGACCATG CCGCTGCTCG AAGGCCTGGA CGGCATCGAG AAGATGTCGA AAAGCAAGAA CAACTACATT GGCATTTCCG AGGACGCCAA TTCCATGTTC GCCAAGGTGC TGTCGATCTC CGATGTGCTG ATGTGGAAGT GGTACACGCT GCTGTCGTTC AAAAGCGAAG CCGACATCGC CGCGCTGAAG GCCGAAATTG AAGCCGGCCG CAACCCCAAG GACGCCAAGG TCGCGCTGGC CAAGGAAATC ACCGCGCGCT TTCATTCCGC CGCAGCAGCG GACGCCGCCG AGCAGGATTT CATCAACCGC AGCAAGGGCG GCGTGCCCGA CGAGATTCCC GACGTGTCGC TGTCGGGCGC GCCGCTGGGC ATAGGCGCGC TGCTCAAGGC GGCCGGGCTG GCGCCTTCGG GCAGCGAAGC CAGCCGCCTG ATCGACGGCG GCGGCGTGCG CGTGGACTCC AGCGTGGTCA GCGACAAGGC GCTCAAGCTG GCGGCCGGGA CTTACGTGGT GCAGGTCGGC AAGCGCAAGT TTGCCCGCGT GACGCTGGCA TGA
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Protein sequence | MNQELVTNSP LSDRVKTALA VSLRGCDELI PQDEWTRKLV RSEATGVPLR IKLGLDPTAP DIHIGHTVVL NKMRQLQDLG HTVIFLIGDF TSLIGDPSGR NSTRPPLTPE QIKVNAETYY RQASLVLDPA KTEIRYNSEW CDPLGARGMI QLASRYTVAR MMERNDFHDR FKAGQSISVH EFLYPLMQGY DSVALKSDLE LGGTDQKFNL LMGRHLQQEY GQEPQCILTM PLLEGLDGIE KMSKSKNNYI GISEDANSMF AKVLSISDVL MWKWYTLLSF KSEADIAALK AEIEAGRNPK DAKVALAKEI TARFHSAAAA DAAEQDFINR SKGGVPDEIP DVSLSGAPLG IGALLKAAGL APSGSEASRL IDGGGVRVDS SVVSDKALKL AAGTYVVQVG KRKFARVTLA
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