| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0503 |
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| Symbol | |
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| ID | 4686406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 530809 |
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| End bp | 533061 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639833499 |
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| Product | helicase c2 |
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| Protein accession | YP_980745 |
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| Protein GI | 121603416 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.516825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGT CCACCACCCC GTCCGCGCTT GAAGGCGCGC CCCTGCCGAG CCCCTCGATC
CAGCTTCCAG CCGCCGTGCC GGCGCATGCC TCTGAGCAGG GCATCGACCC TGATCAACTG
GAAGCCGCGC GCATTCGGCT GGAACTCTTG TATGGCGAGG TCGCTGCCGA CTGGCCCGGC
TTCATTGCCC GTCCCGGCCA GTACCAGATG ATGCAGGCGT GCCTGCTGAC CTTCCTGTCG
GCCAAGGCGC CCGAGGACGA GGTCCGCACG GGCAGCCATC TGGCGCAACT CGAAGCAGGA
ACGGGCACCG GTAAGACGGT CGCCTACTGC CTGGCGGCCA TCGTGGCGTC CGAGGTGCTC
AAGAAAACCG TCATCGTCTC CACGGCCACG GTGGCCCTGC AGGAGCAGCT GTTCCAGAAA
GACCTGCCGC GCCTGGCTGA AATCATTCCC GATCTGCGCT ACGACATCCT CAAGGGCCGC
GCCCGCTATG TCTGCGAAAG CCGCCTCGAA GGCGTGATCA ACGACGTGGC GCAGGACGGC
CTGCTCACGG GTGAGCTGTT CCAGGACTCC TTTGGCGACG CCCGCCGGCA GGCGGCCGGC
ATTGTGCGCG ACCGCACCCA GGCGATGCGC TGGTTCAAGA GCAGCGCAAA GAAACTCAAC
AGCGGTACTT GGGACGGCGA CATCGACTCC CTCGCGCAGC CGCCCGACCC GCAGGACTGG
CGTCAGGTCC AGGCCAATGC CCACGCCTGC AACGGCGGGC AGTGCGAGCA TTTCAGGAAC
TGCGCCTTCT TCAAGGCCAG GCGCCAGGCG GCCAGCGCGA CGCTGCAGGT GGCCAACCAC
GCGCTGGTGC TGGCGACGCT GCAGACCGAC AGCAGCCTGA TCGATGCGGG CAACACGCTG
TTCGTGTTCG ACGAGGCGCA CCACCTGCCG GGCATCGCGG CCGAGCAGTT CTCGTACCGG
GCACGCCTGG GAACGAGCAG CAAATTGCTC ACCAGCCTGC GAACGGTGGC GCTGCGCCAT
GGCAAGGCCC TGCCGGCATC CACCCGGCCG GACCCGGTGG CCTTTGCCCA GCTAGTCACC
GGCTGCACCG ACAAGCTGGC GATGCTGGAG CGCTACTGGC AGGATGCCCA ACTCGTCAGC
GCCGACCAGC CCGTCCACCG CTTCGCCCAG GGCCGTATCC CGGAGGCCCT GGTTCTCGAG
TGCCAGGAAC TCGCCACGCT CATCCGCGCC ATTGCCTCGG TGGTTTCAAG CATCGCGGCG
GCATTGAAGG AGCCCGACGA ATCGAAGTCG CCCACCCAGC GCGAGGAGCA GACCCATGCC
GGCGTCGAGC TGGGCGTCTA TCTGTCGCGG CTTGGCACCC TGGACAAGCT GCTGAGCGCC
TGGGCCACCC ATGACCGGGT GCCGTGGGCC AAGTGGATCG AATGGGCAGA GGATGGGGCC
GGCAGCGCGC CGGACGCCTG GCTGTGCGCC AGCCCGATGA CGGCAGCCCA GGTTTTGTCG
AAGAACCTGT GGAACAAGGT CAGCGCCGCC GTCTGCACCT CGGCCACGCT GACGGCCTGC
GGCAGCTTTG ATTTTTTTGA CCGCCTGAGC GGCATGAACC GCTTTCCCGA GCGCCGGTCG
CTGGTCGTGG ATTCGCCCTT TGACTATGCG ACGCAGGGCG AGTTGCGCAT CGCGCCCATG
ACGCATTCGC CCAAGAGTCC GGGTTTCTCC GATGAGCTGT GCGACAAGCT GCCCGGGCTG
CTGCGCGAGC ACCCGCACGG GCAGCTGGTG CTGTTCACGT CCAGGCGCCA GATGCAGGCT
TGTCATGCGG CGCTACCCCA GGATTTGCTG GACCAAGTGC TGGTGCAGGG CGTTCGCTCG
CGCACCGAGC TGCTCAGGGA GCACGGCCGG CGCGTCAAGG CCGGCGAGCG TTCCATCATC
TTTGGCCTGC AGTCCTTTGG CGAAGGCATC GACCTGCCGG GCCGGCTGTG CGAGCATGTG
GTGATCGACA AGCTGCCGTT CACGCCGCCA AGCTCGCCGG TCGAGGAAGC GCTGGCCGAG
TGGCTGAGCG GGCAGGGGCG CGACCCGTTT GCCGAGCTGT CGGTGCCGCG TGCGGGCATG
AAGCTGGCGC AATGGGCCGG GCGCGGCGTG AGAACCGTGA CCGACCGGGC TGTCATCACG
GTGTGCGACA CCCGGCTGGT GACGATGCGC TACGGGCAAG CCATCCTGGC AGGCCTGCCG
GCATTCCCGC TGGTGCGTAG CGCTCCGACC TGA
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| Protein sequence | MSLSTTPSAL EGAPLPSPSI QLPAAVPAHA SEQGIDPDQL EAARIRLELL YGEVAADWPG
FIARPGQYQM MQACLLTFLS AKAPEDEVRT GSHLAQLEAG TGTGKTVAYC LAAIVASEVL
KKTVIVSTAT VALQEQLFQK DLPRLAEIIP DLRYDILKGR ARYVCESRLE GVINDVAQDG
LLTGELFQDS FGDARRQAAG IVRDRTQAMR WFKSSAKKLN SGTWDGDIDS LAQPPDPQDW
RQVQANAHAC NGGQCEHFRN CAFFKARRQA ASATLQVANH ALVLATLQTD SSLIDAGNTL
FVFDEAHHLP GIAAEQFSYR ARLGTSSKLL TSLRTVALRH GKALPASTRP DPVAFAQLVT
GCTDKLAMLE RYWQDAQLVS ADQPVHRFAQ GRIPEALVLE CQELATLIRA IASVVSSIAA
ALKEPDESKS PTQREEQTHA GVELGVYLSR LGTLDKLLSA WATHDRVPWA KWIEWAEDGA
GSAPDAWLCA SPMTAAQVLS KNLWNKVSAA VCTSATLTAC GSFDFFDRLS GMNRFPERRS
LVVDSPFDYA TQGELRIAPM THSPKSPGFS DELCDKLPGL LREHPHGQLV LFTSRRQMQA
CHAALPQDLL DQVLVQGVRS RTELLREHGR RVKAGERSII FGLQSFGEGI DLPGRLCEHV
VIDKLPFTPP SSPVEEALAE WLSGQGRDPF AELSVPRAGM KLAQWAGRGV RTVTDRAVIT
VCDTRLVTMR YGQAILAGLP AFPLVRSAPT
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