| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_0407 |
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| Symbol | |
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| ID | 4686693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 415038 |
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| End bp | 418895 |
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| Gene Length | 3858 bp |
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| Protein Length | 1285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639833400 |
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| Product | hypothetical protein |
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| Protein accession | YP_980651 |
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| Protein GI | 121603322 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.480631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000026905 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCAACA CCTCTTTTGA ATTACCCGCA CTGGGCGGAA GTGCTTGCTA TGGGTTTACT
TCGTCGGCCT CAATGCCGGG CTGGACCAGT ACTGAACCGA CCGCCGCTGA CTTATCTGGT
TCCTGCACCG GGGAGACCGC CGGTGCAAAT GCAATTGAAA TCTGGCGGAG TAACTTTAAC
GGCGTATTGG CATTTTCAGG AAGCCAGCAC GTGGAACTCA ATGCTCACAG TCCGCGCCGC
CTATCCCAGA CAATTTGCAT GCAAACGGGG GACACGGTAA GTTGGGCCTA TTCACATCGC
GCACGAGTTA ACCCTGGCAA TGTTATCGAT GTCGCCAATT TTTCAGTGGG CAACCCCACG
AATACAGTGA ATATCGCGCG TACTGATACA AATGGCGTGG TTTCCTCCAC TGCGGCTGAC
TGTCGCAGCA GCTCGTCAAT CACCAGCCCA ATTTGTTCCG GCAGTACGTC GTCGAGTTGG
GGGCGCTATA CAGGCACATT CACCTGGCAG GGGAGCGGCG GCAATCAGGA CATAGGGTTC
GAAGCGACCA CTGGCACATC CTTCGGAAAC TTCCTGGACG ACGTTCAGTT CACCCTCAAG
CCGGTTATCG AATTCTCCAG CGCCACCCTG ACAAGCGCTG AGAGCGGGGG CACGGTTAAT
TTCCAGTTGC GCATCGCCGG CATCGTTCCC TCCGGCGGCA TCGCGGTTCC TTTCACCATT
ACCGGCACCG CGACGGGCGG CGGCGTGGAC TACACCCTGC CCAGCACCTT TACCGTACCG
GCAGGTGATT ACGACGTTGG CTCCCTGGTG AATGTCCCCG TGACCCTCAT CAATGACTCT
CTGCCCGAAG CGACCGAAAC GGTGATCGTC ACGATCACTC CTCCCGCTGG CAGTGCCCCG
TATCGCCTGG GCTCAACGGT TACCTGCGGT GGCACCGCCA TTGGCACCGC CACCTTGTCC
ATCACGGACG ACGATGTGTC GGTCACGCTC AATAAAGCGC TGGTTCCCGT GTCAAACAGC
GGCTTGTTCA ATCTTTCGAT CACAGGGGGC AGCCCCAGTC CCACCGGCGG GACAAATCCG
GCCAACAATC AGGGGAATGG CGGCAGCACC GGCGCCGTCA AGGTCAATCC ATCGAGCGTC
ATCACCCTGA CCGAAACCGC CGGCACCAGT ACCTCGCTTG CCAACTATTC GACCGCACTC
AGTTGTGTTG ACGCCAGCGC CGCCAGTGTC ACAGTCACCG GCAGCGGCAC CAGCCGCAGC
ATCACCACCC CCGCCTTGAC CGCTTCGGCG GCGGCGCGAA CCATCACTTG CACCTATACC
AACACTTCCA CGCAGGCGAC CATCACGCTG CAAAAATCGT TGGCCGGCGA CCGCATGGCG
GTGAGCGACC AGTTCAGTGT CGCGATCCGC ACCGGTGGCG TCTCAGGCAC GGTGGTAAGC
AGCGCCACCA CCACCGGAAC CATGGCGACC GTCACGACGG GCACCACTGG GAGCTACAGT
GCAGCGGTTG GAACAACCTA CACCCTCACC GAGGCGGCCG CAGCCGGTGA CCTGGCCAAT
TACAGTGCCG CACTCAGCTG TGTTGACACC GCAGGCGTTC AGACTGGGCT GCCTTCCGGG
GTGGCGTTTA ACCCTGCCGT GGGCTACGCT GTCACGCCGG TGGCAGGCGC CGCGCTCAGT
TGCACCATCA CGAACACACC CATATTGGTC CATCCGGCAG CGGCGCCGGT CATCAGTTGC
TCAAGCGACG GCAATATCTT CAACACCGCC TATAACGGCA ACCCTGCAGG GCCGGCAAAA
ACCTCGGGAC TGGACAATTT GTGGGAACGT GGCGCAACAT TCGGCGCGTT GGAGCCAACA
AGCTGGACCT TGGCCAATGT GGCAACCACC AACCCTGGGT GGAGCGCCTA TTCTGCTTTC
CCTGCTTCAC GCTTTATTAC GCATCAGGCA AACACGGACC ATACCCCCCT TGGCAATGTT
GACTTGTGGT ATCGCTACGT CTTCACCATG GATTCAAGTG TGGTTTTGTC CAGTTTTCGT
CTCGCGATGG ATTTTTACGC GGACAACAGC GTCCAGGCCA TCTATGTCAA CGGTGTGCCG
CAGAGCGTTG CCGGCGTGCC AGACGGCAAT CCCTATTTCG CGCTGCATTA CAACCTGGGC
AATGCGCTTT CGGCCAACCT GACCAACAAC TGGCAGGCGG GAACCAACAC GATTCTGGTG
AGGGTCAGCA GTGGTCCGAA TGCGATCGGC TTCATGGCCA AAAATGCCAT ATCCGCCGTT
TGCCAGAGCA AGGTGAGTCT GCAAAAAGCC CTTGGCGGAC TTGGCCGATT GGCTGTCGCA
GACCAGTTCA CGGTTGACAT CCGCACGGGT GGCGCTTTGG GCACGGTTGT CAACAGCACC
ACGAACTCGA CGACGCTGGG TAGCGGTGCA ACCGTTACCG CAGGCAGCGG CAACACGGGC
GTGTATTCAG GCATCGCAGG AACGGCATAT ACCCTGAATG AAGCCATGGC ATCGGGAAGT
ACGTCAACAT TGACCAGTTA TACCCGCACC CTGAGTTGCA CCAACGTGGG CGGCACCACC
AACGTAAGCA GCTTCAGCAG CTTGCCACTC ACCTTCAGTC CGCTCAGTGG GGACAACGTG
CTTTGCACGG TCACCAACAC GCCAGCGGGC GCTTCCATCA CGGGCCGGGT CTTTCTGGAC
AACGGCGTGT CCAGCGGCAC GGCCAATGAC GGCCTGATCA ATGGCGGTGA AGCGGGGCTG
GCCGGCATCA CAGTGCGCCT GACCAACTGC GCGGCCACGG TGCATGCCAG CGGCATGACG
GGCGGCACCG GTGCTTACAA CCTGGCCGTG CCCACCGGCA CCGCCACTGG CGCCGCACTG
TGCGTGGAGC AGACCAATCA AGGCACACGT ATATCAACCG GCGCATCGGT AGACAGCACC
GCGCTGCCTT CTGGCACCGC CACGCCTGTG GCATCCACCA CCTACACCTA TACCCGCACC
AGCACGCCAG ACCGTATCGC CTTTACCTAT AACGGCACCC GGCACAGCGA CTTGAATTTC
GGCGATGTGG ATACAGGCAC CTTCGCCACC AACGGTTCCA AATCTGGACT GCCCGACACC
ACGGTAAGTT ATCCGCACAC CTTCACCGCA GGCACGGGCG GCAGCGTGAG TTTTGCAATT
TCAGCCGCCA ACCCGGCGCC CACTCTGACG GGCTGGAGCG AAAAGATTTT TGCCGATCCC
GGTTGCACCG GTACGCTGCA GGCTGGCGCG GCCCAGCTTT ACCCGCCCGC TGCGGCGGCA
ACGACCGTCG TCTTCGGCCA GAAGGTGTGC GTGATCATGC AGGAATTCAT CCCCGGCACG
GCGCAGATGA GCTACAGCAA CGATGCCACG GTGCAGGCCA ACTTCAGCTA CAGCAACGCC
AGCCCAGCGC TGGCCACAGC CAGCTACACG CTGCACGACA TCACCAACGT GGGCAACGGT
ACGCTGGAGT TGAAAAAGGA AGTGCGCAAC GTGACGCAAG GGGTGTTGAC CTTTGGCATC
AACAATCTAG CCAAGTCGGG CGAGACCCTG GAATACCGTA TCAGCTACAC CAACAACGCA
GCGACGCCGA TCAGCAACCT GGTGGTGAAC GACACAACGC CGGTCTATAC AAGCTTTGTT
GCAAGCAGCA CGGGCACGAC GCCGGCCACA CTGACGACCT GCACGAAAAA CACGCCATTC
AACCCACTTC CCCAACCTGC GGTAAGTTGT GCTACGGCCC AGGCGGCGGG TAATACCGGC
AGCATCAGCT GGAAGTTCAC GGGATCGCTG AGCCCCAGCG GCACCGGTGA GGTGCTGTTC
CAGGTGAAGG TCGATTGA
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| Protein sequence | MVNTSFELPA LGGSACYGFT SSASMPGWTS TEPTAADLSG SCTGETAGAN AIEIWRSNFN
GVLAFSGSQH VELNAHSPRR LSQTICMQTG DTVSWAYSHR ARVNPGNVID VANFSVGNPT
NTVNIARTDT NGVVSSTAAD CRSSSSITSP ICSGSTSSSW GRYTGTFTWQ GSGGNQDIGF
EATTGTSFGN FLDDVQFTLK PVIEFSSATL TSAESGGTVN FQLRIAGIVP SGGIAVPFTI
TGTATGGGVD YTLPSTFTVP AGDYDVGSLV NVPVTLINDS LPEATETVIV TITPPAGSAP
YRLGSTVTCG GTAIGTATLS ITDDDVSVTL NKALVPVSNS GLFNLSITGG SPSPTGGTNP
ANNQGNGGST GAVKVNPSSV ITLTETAGTS TSLANYSTAL SCVDASAASV TVTGSGTSRS
ITTPALTASA AARTITCTYT NTSTQATITL QKSLAGDRMA VSDQFSVAIR TGGVSGTVVS
SATTTGTMAT VTTGTTGSYS AAVGTTYTLT EAAAAGDLAN YSAALSCVDT AGVQTGLPSG
VAFNPAVGYA VTPVAGAALS CTITNTPILV HPAAAPVISC SSDGNIFNTA YNGNPAGPAK
TSGLDNLWER GATFGALEPT SWTLANVATT NPGWSAYSAF PASRFITHQA NTDHTPLGNV
DLWYRYVFTM DSSVVLSSFR LAMDFYADNS VQAIYVNGVP QSVAGVPDGN PYFALHYNLG
NALSANLTNN WQAGTNTILV RVSSGPNAIG FMAKNAISAV CQSKVSLQKA LGGLGRLAVA
DQFTVDIRTG GALGTVVNST TNSTTLGSGA TVTAGSGNTG VYSGIAGTAY TLNEAMASGS
TSTLTSYTRT LSCTNVGGTT NVSSFSSLPL TFSPLSGDNV LCTVTNTPAG ASITGRVFLD
NGVSSGTAND GLINGGEAGL AGITVRLTNC AATVHASGMT GGTGAYNLAV PTGTATGAAL
CVEQTNQGTR ISTGASVDST ALPSGTATPV ASTTYTYTRT STPDRIAFTY NGTRHSDLNF
GDVDTGTFAT NGSKSGLPDT TVSYPHTFTA GTGGSVSFAI SAANPAPTLT GWSEKIFADP
GCTGTLQAGA AQLYPPAAAA TTVVFGQKVC VIMQEFIPGT AQMSYSNDAT VQANFSYSNA
SPALATASYT LHDITNVGNG TLELKKEVRN VTQGVLTFGI NNLAKSGETL EYRISYTNNA
ATPISNLVVN DTTPVYTSFV ASSTGTTPAT LTTCTKNTPF NPLPQPAVSC ATAQAAGNTG
SISWKFTGSL SPSGTGEVLF QVKVD
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